Oligo pools as an affordable source of synthetic DNA for cost‐effective library construction in protein‐and metabolic pathway engineering
BP Kuiper, RC Prins, S Billerbeck - ChemBioChem, 2022 - Wiley Online Library
The construction of custom libraries is critical for rational protein engineering and directed
evolution. Array‐synthesized oligo pools of thousands of user‐defined sequences (up to∼ …
evolution. Array‐synthesized oligo pools of thousands of user‐defined sequences (up to∼ …
Challenges and opportunities with CRISPR activation in bacteria for data-driven metabolic engineering
J Fontana, D Sparkman-Yager, JG Zalatan… - Current Opinion in …, 2020 - Elsevier
Highlights•CRISPR activation is an emerging tool for engineering bacterial metabolism.•The
promoter design rules for effective CRISPR activation in bacteria are complex.•Guide RNAs …
promoter design rules for effective CRISPR activation in bacteria are complex.•Guide RNAs …
HEx: A heterologous expression platform for the discovery of fungal natural products
CJB Harvey, M Tang, U Schlecht, J Horecka… - Science …, 2018 - science.org
For decades, fungi have been a source of US Food and Drug Administration–approved
natural products such as penicillin, cyclosporine, and the statins. Recent breakthroughs in …
natural products such as penicillin, cyclosporine, and the statins. Recent breakthroughs in …
Multiplexed precision genome editing with trackable genomic barcodes in yeast
Our understanding of how genotype controls phenotype is limited by the scale at which we
can precisely alter the genome and assess the phenotypic consequences of each …
can precisely alter the genome and assess the phenotypic consequences of each …
Engineered production of strictosidine and analogues in yeast
J Misa, JM Billingsley, K Niwa, RK Yu… - ACS synthetic …, 2022 - ACS Publications
Monoterpene indole alkaloids (MIAs) are an expansive class of plant natural products, many
of which have been named on the World Health Organization's List of Essential Medicines …
of which have been named on the World Health Organization's List of Essential Medicines …
An inducible CRISPR interference library for genetic interrogation of Saccharomyces cerevisiae biology
A Momen-Roknabadi, P Oikonomou, M Zegans… - Communications …, 2020 - nature.com
Genome-scale CRISPR interference (CRISPRi) is widely utilized to study cellular processes
in a variety of organisms. Despite the dominance of Saccharomyces cerevisiae as a model …
in a variety of organisms. Despite the dominance of Saccharomyces cerevisiae as a model …
Engineering industrial yeast for improved tolerance and robustness
Z Wan, H Hu, K Liu, Y Qiao, F Guo… - Critical Reviews in …, 2024 - Taylor & Francis
As an important cell factory, industrial yeast has been widely used for the production of
compounds ranging from bulk chemicals to complex natural products. However, various …
compounds ranging from bulk chemicals to complex natural products. However, various …
[HTML][HTML] Genome-scale CRISPRi screening: a powerful tool in engineering microbiology
L Sun, P Zheng, J Sun, VF Wendisch, Y Wang - Engineering Microbiology, 2023 - Elsevier
Deciphering gene function is fundamental to engineering of microbiology. The clustered
regularly interspaced short palindromic repeats (CRISPR) system has been adapted for …
regularly interspaced short palindromic repeats (CRISPR) system has been adapted for …
Progress in Gene Editing and Metabolic Regulation of Saccharomyces cerevisiae with CRISPR/Cas9 Tools
Y Liang, S Gao, X Qi, LN Valentovich… - ACS Synthetic …, 2024 - ACS Publications
The CRISPR/Cas9 systems have been developed as tools for genetic engineering and
metabolic engineering in various organisms. In this review, various aspects of CRISPR/Cas9 …
metabolic engineering in various organisms. In this review, various aspects of CRISPR/Cas9 …
Design principles for nuclease-deficient CRISPR-based transcriptional regulators
MK Jensen - FEMS yeast research, 2018 - academic.oup.com
Abstract The engineering of Clustered Regularly Interspaced Short Palindromic Repeats
(CRISPR)-CRISPR-associated proteins continues to expand the toolkit available for genome …
(CRISPR)-CRISPR-associated proteins continues to expand the toolkit available for genome …