[HTML][HTML] Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications

M Su, T Pan, QZ Chen, WW Zhou, Y Gong, G Xu… - Military Medical …, 2022 - Springer
The application of single-cell RNA sequencing (scRNA-seq) in biomedical research has
advanced our understanding of the pathogenesis of disease and provided valuable insights …

[HTML][HTML] An integrated cell atlas of the lung in health and disease

L Sikkema, C Ramírez-Suástegui, DC Strobl… - Nature medicine, 2023 - nature.com
Single-cell technologies have transformed our understanding of human tissues. Yet, studies
typically capture only a limited number of donors and disagree on cell type definitions …

Spatiotemporal molecular dynamics of the developing human thalamus

CN Kim, D Shin, A Wang, TJ Nowakowski - Science, 2023 - science.org
The thalamus plays a central coordinating role in the brain. Thalamic neurons are organized
into spatially distinct nuclei, but the molecular architecture of thalamic development is poorly …

Molecular features driving cellular complexity of human brain evolution

E Caglayan, F Ayhan, Y Liu, RM Vollmer, E Oh… - Nature, 2023 - nature.com
Human-specific genomic changes contribute to the unique functionalities of the human
brain,,,–. The cellular heterogeneity of the human brain, and the complex regulation of gene …

Single-cell transcriptomics in tissue engineering and regenerative medicine

A Ruta, K Krishnan, JH Elisseeff - Nature Reviews Bioengineering, 2024 - nature.com
Regenerative medicine and tissue engineering aim to promote functional rebuilding of
damaged tissue. Comprehensively profiling cell identity, function and interaction in healthy …

[HTML][HTML] NBAtlas: A harmonized single-cell transcriptomic reference atlas of human neuroblastoma tumors

N Bonine, V Zanzani, A Van Hemelryk, B Vanneste… - Cell Reports, 2024 - cell.com
Neuroblastoma, a rare embryonic tumor arising from neural crest development, is
responsible for 15% of pediatric cancer-related deaths. Recently, several single-cell …

Implementing distinct spatial proteogenomic technologies; opportunities, challenges, and key considerations

B Verstappe, CL Scott - Clinical and experimental immunology, 2024 - academic.oup.com
Our ability to understand the cellular complexity of tissues has been revolutionised in recent
years with significant advances in proteogenomic technologies including those enabling …

[HTML][HTML] A global transcriptional atlas of the effect of acute sleep deprivation in the mouse frontal cortex

K Ford, E Zuin, D Righelli, E Medina, H Schoch… - Iscience, 2024 - cell.com
Sleep deprivation (SD) has negative effects on brain and body function. Sleep problems are
prevalent in a variety of disorders, including neurodevelopmental and psychiatric conditions …

[HTML][HTML] Airway epithelial cell response to RSV is mostly impaired in goblet and multiciliated cells in asthma

ACA Gay, M Banchero, O Carpaij, TM Kole, L Apperloo… - thorax, 2024 - thorax.bmj.com
Background In patients with asthma, respiratory syncytial virus (RSV) infections can cause
disease exacerbation by infecting the epithelial layer of the airways, inducing subsequent …

[HTML][HTML] Understanding and Therapeutic Application of Immune Response in Major Histocompatibility Complex (MHC) Diversity Using Multimodal Artificial Intelligence

Y Matsuzaka, R Yashiro - BioMedInformatics, 2024 - mdpi.com
Human Leukocyte Antigen (HLA) is like a device that monitors the internal environment of
the body. T lymphocytes immediately recognize the HLA molecules that are expressed on …