The influence of spaceflight and simulated microgravity on bacterial motility and chemotaxis

JM Acres, MJ Youngapelian, J Nadeau - npj Microgravity, 2021 - nature.com
As interest in space exploration rises, there is a growing need to quantify the impact of
microgravity on the growth, survival, and adaptation of microorganisms, including those …

Bacterial protein networks: properties and functions

A Typas, V Sourjik - Nature Reviews Microbiology, 2015 - nature.com
Distinct cellular functions are executed by separate groups of proteins, organized into
complexes or functional modules, which are ultimately interconnected in cell-wide protein …

The binary protein-protein interaction landscape of Escherichia coli

SV Rajagopala, P Sikorski, A Kumar, R Mosca… - Nature …, 2014 - nature.com
Efforts to map the Escherichia coli interactome have identified several hundred
macromolecular complexes, but direct binary protein-protein interactions (PPIs) have not …

From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later

V Barbe, S Cruveiller, F Kunst, P Lenoble… - …, 2009 - microbiologyresearch.org
Comparative genomics is the cornerstone of identification of gene functions. The immense
number of living organisms precludes experimental identification of functions except in a …

Global functional atlas of Escherichia coli encompassing previously uncharacterized proteins

P Hu, SC Janga, M Babu, JJ Díaz-Mejía, G Butland… - PLoS …, 2009 - journals.plos.org
One-third of the 4,225 protein-coding genes of Escherichia coli K-12 remain functionally
unannotated (orphans). Many map to distant clades such as Archaea, suggesting …

The landscape of microbial phenotypic traits and associated genes

M Brbić, M Piškorec, V Vidulin, A Kriško… - Nucleic acids …, 2016 - academic.oup.com
Bacteria and Archaea display a variety of phenotypic traits and can adapt to diverse
ecological niches. However, systematic annotation of prokaryotic phenotypes is lacking. We …

Bactofilins, a ubiquitous class of cytoskeletal proteins mediating polar localization of a cell wall synthase in Caulobacter crescentus

J Kühn, A Briegel, E Mörschel, J Kahnt, K Leser… - The EMBO …, 2010 - embopress.org
The cytoskeleton has a key function in the temporal and spatial organization of both
prokaryotic and eukaryotic cells. Here, we report the identification of a new class of polymer …

Improving the yeast two-hybrid system with permutated fusions proteins: the Varicella Zoster Virus interactome

T Stellberger, R Häuser, A Baiker, VR Pothineni… - Proteome science, 2010 - Springer
Background Yeast two-hybrid (Y2H) screens have been among the most powerful methods
to detect and analyze protein-protein interactions. However, they suffer from a significant …

Identification of Campylobacter jejuni Genes Involved in Its Interaction with Epithelial Cells

V Novik, D Hofreuter, JE Galán - Infection and immunity, 2010 - Am Soc Microbiol
Campylobacter jejuni is the leading cause of infectious gastroenteritis in industrialized
nations. Its ability to enter and survive within nonphagocytic cells is thought to be very …

Improving yeast two-hybrid screening systems

M Koegl, P Uetz - Briefings in Functional Genomics and …, 2007 - academic.oup.com
Yeast two-hybrid (Y2H) screening methods are an effective means for the detection of
protein–protein interactions. Optimisation and automation has increased the throughput of …