Mitochondrial and plastid genome architecture: reoccurring themes, but significant differences at the extremes

DR Smith, PJ Keeling - Proceedings of the National …, 2015 - National Acad Sciences
Mitochondrial and plastid genomes show a wide array of architectures, varying immensely in
size, structure, and content. Some organelle DNAs have even developed elaborate …

The evolution of sex: a new hypothesis based on mitochondrial mutational erosion: mitochondrial mutational erosion in ancestral eukaryotes would favor the evolution …

JC Havird, MD Hall, DK Dowling - Bioessays, 2015 - Wiley Online Library
The evolution of sex in eukaryotes represents a paradox, given the “twofold” fitness cost it
incurs. We hypothesize that the mutational dynamics of the mitochondrial genome would …

Mutation rates in plastid genomes: they are lower than you might think

DR Smith - Genome Biology and Evolution, 2015 - academic.oup.com
Within plastid-bearing species, the mutation rate of the plastid genome is often assumed to
be greater than that of the mitochondrial genome. This assumption is based on early …

Conservative and compensatory evolution in oxidative phosphorylation complexes of angiosperms with highly divergent rates of mitochondrial genome evolution

JC Havird, NS Whitehill, CD Snow, DB Sloan - Evolution, 2015 - academic.oup.com
Interactions between nuclear and mitochondrial gene products are critical for eukaryotic cell
function. Nuclear genes encoding mitochondrial-targeted proteins (N-mt genes) experience …

The Glaucophyta: the blue-green plants in a nutshell

C Jackson, S Clayden… - Acta Societatis …, 2015 - agro.icm.edu.pl
The Glaucophyta is one of the three major lineages of photosynthetic eukaryotes, together
with viridiplants and red algae, united in the presumed monophyletic supergroup …

Linear plasmids and the rate of sequence evolution in plant mitochondrial genomes

JM Warren, MP Simmons, Z Wu… - Genome Biology and …, 2016 - academic.oup.com
The mitochondrial genomes of flowering plants experience frequent insertions of foreign
sequences, including linear plasmids that also exist in standalone forms within …

Evolutionary patterns of nucleotide substitution rates in plastid genomes of Quercus

X Li, Y Li, SP Sylvester, M Zang… - Ecology and …, 2021 - Wiley Online Library
Molecular evolution, including nucleotide substitutions, plays an important role in
understanding the dynamics and mechanisms of species evolution. Here, we sequenced …

Auxenochlorella protothecoides and Prototheca wickerhamii plastid genome sequences give insight into the origins of non-photosynthetic algae

D Yan, Y Wang, T Murakami, Y Shen, J Gong… - Scientific Reports, 2015 - nature.com
The forfeiting of photosynthetic capabilities has occurred independently many times
throughout eukaryotic evolution. But almost all non-photosynthetic plants and algae still …

Plastid genomes from diverse glaucophyte genera reveal a largely conserved gene content and limited architectural diversity

F Figueroa-Martinez, C Jackson… - Genome biology and …, 2019 - academic.oup.com
Plastid genome (ptDNA) data of Glaucophyta have been limited for many years to the genus
Cyanophora. Here, we sequenced the ptDNAs of Gloeochaete wittrockiana, Cyanoptyche …

[HTML][HTML] Comparative and Adaptive Analyses of the Complete Chloroplast Genome Diversity in Sium serra

SJ Park, SJ Park - Genes, 2024 - mdpi.com
Background/Objectives: Sium serra is distributed in Korea, China, and Japan. It was first
identified as the genus Pimpinella and then reclassified as Sium by Kitagawa. Some Sium …