Repair of DNA breaks by break-induced replication

ZW Kockler, B Osia, R Lee, K Musmaker… - Annual review of …, 2021 - annualreviews.org
Double-strand DNA breaks (DSBs) are the most lethal type of DNA damage, making DSB
repair critical for cell survival. However, some DSB repair pathways are mutagenic and …

Break-induced replication mechanisms in yeast and mammals

X Wu, A Malkova - Current opinion in genetics & development, 2021 - Elsevier
Break-induced replication (BIR) is a pathway specialized in repair of double-strand DNA
breaks with only one end capable of invading homologous template that can arise following …

Tracking break-induced replication shows that it stalls at roadblocks

L Liu, Z Yan, BA Osia, J Twarowski, L Sun, J Kramara… - Nature, 2021 - nature.com
Break-induced replication (BIR) repairs one-ended double-strand breaks in DNA similar to
those formed by replication collapse or telomere erosion, and it has been implicated in the …

[HTML][HTML] Recombination of repeat elements generates somatic complexity in human genomes

G Pascarella, CC Hon, K Hashimoto, A Busch… - Cell, 2022 - cell.com
Non-allelic recombination between homologous repetitive elements contributes to evolution
and human genetic disorders. Here, we combine short-and long-DNA read sequencing of …

[HTML][HTML] Single-strand annealing in cancer

J Blasiak - International Journal of Molecular Sciences, 2021 - mdpi.com
DNA double-strand breaks (DSBs) are among the most serious forms of DNA damage. In
humans, DSBs are repaired mainly by non-homologous end joining (NHEJ) and …

[PDF][PDF] New genomic techniques: State-of-the-art review

W Broothaerts, S Jacchia… - … Office of the …, 2021 - publications.jrc.ec.europa.eu
This review of the scientific and technological developments on New Genomic Techniques
(NGTs) is aimed to provide the technical status of NGTs with respect to their diverse …

Cellular and genomic approaches for exploring structural chromosomal rearrangements

Q Hu, EG Maurais, P Ly - Chromosome Research, 2020 - Springer
Human chromosomes are arranged in a linear and conserved sequence order that
undergoes further spatial folding within the three-dimensional space of the nucleus …

Single‐strand annealing: Molecular mechanisms and potential applications in CRISPR‐Cas‐based precision genome editing

TV Vu, S Das, CC Nguyen, J Kim… - Biotechnology …, 2022 - Wiley Online Library
Background Spontaneous double‐stranded DNA breaks (DSBs) frequently occur within the
genome of all living organisms and must be well repaired for survival. Recently, more …

[HTML][HTML] BLM has contrary effects on repeat-mediated deletions, based on the distance of DNA DSBs to a repeat and repeat divergence

C Mendez-Dorantes, LJ Tsai, E Jahanshir… - Cell reports, 2020 - cell.com
Repeat-mediated deletions (RMDs) often involve repetitive elements (eg, short interspersed
elements) with sequence divergence that is separated by several kilobase pairs (kbps). We …

[HTML][HTML] Transgene removal using an in cis programmed homing endonuclease via single-strand annealing in the mosquito Aedes aegypti

K Chae, B Contreras, JS Romanowski… - Communications …, 2024 - nature.com
While gene drive strategies have been proposed to aid in the control of mosquito-borne
diseases, additional genome engineering technologies may be required to establish a …