Thermophiles in the genomic era: Biodiversity, science, and applications
Thermophiles and hyperthermophiles are present in various regions of the Earth, including
volcanic environments, hot springs, mud pots, fumaroles, geysers, coastal thermal springs …
volcanic environments, hot springs, mud pots, fumaroles, geysers, coastal thermal springs …
Impact of single-cell genomics and metagenomics on the emerging view of extremophile “microbial dark matter”
Despite> 130 years of microbial cultivation studies, many microorganisms remain resistant
to traditional cultivation approaches, including numerous candidate phyla of bacteria and …
to traditional cultivation approaches, including numerous candidate phyla of bacteria and …
A comprehensive census of microbial diversity in hot springs of Tengchong, Yunnan Province China using 16S rRNA gene pyrosequencing
The Rehai and Ruidian geothermal fields, located in Tengchong County, Yunnan Province,
China, host a variety of geochemically distinct hot springs. In this study, we report a …
China, host a variety of geochemically distinct hot springs. In this study, we report a …
Genomic inference of the metabolism and evolution of the archaeal phylum Aigarchaeota
Microbes of the phylum Aigarchaeota are widely distributed in geothermal environments, but
their physiological and ecological roles are poorly understood. Here we analyze six …
their physiological and ecological roles are poorly understood. Here we analyze six …
Diversity of thermophiles in a Malaysian hot spring determined using 16S rRNA and shotgun metagenome sequencing
The Sungai Klah (SK) hot spring is the second hottest geothermal spring in Malaysia. This
hot spring is a shallow, 150-m-long, fast-flowing stream, with temperatures varying from 50 …
hot spring is a shallow, 150-m-long, fast-flowing stream, with temperatures varying from 50 …
Is post-polyploidization diploidization the key to the evolutionary success of angiosperms?
S Dodsworth, MW Chase… - Botanical Journal of the …, 2016 - academic.oup.com
Advances in recent years have revolutionized our understanding of both the context and
occurrence of polyploidy in plants. Molecular phylogenetics has vastly improved our …
occurrence of polyploidy in plants. Molecular phylogenetics has vastly improved our …
Control of temperature on microbial community structure in hot springs of the Tibetan Plateau
The Tibetan Plateau in Northwest China hosts a number of hot springs that represent a
biodiversity hotspot for thermophiles, yet their diversity and relationship to environmental …
biodiversity hotspot for thermophiles, yet their diversity and relationship to environmental …
Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage
JA Dodsworth, PC Blainey, SK Murugapiran… - Nature …, 2013 - nature.com
OP9 is a yet-uncultivated bacterial lineage found in geothermal systems, petroleum
reservoirs, anaerobic digesters and wastewater treatment facilities. Here we use single-cell …
reservoirs, anaerobic digesters and wastewater treatment facilities. Here we use single-cell …
Phylogeny and physiology of candidate phylum 'Atribacteria'(OP9/JS1) inferred from cultivation-independent genomics
MK Nobu, JA Dodsworth, SK Murugapiran… - The ISME …, 2016 - academic.oup.com
The 'Atribacteria'is a candidate phylum in the Bacteria recently proposed to include
members of the OP9 and JS1 lineages. OP9 and JS1 are globally distributed, and in some …
members of the OP9 and JS1 lineages. OP9 and JS1 are globally distributed, and in some …
Chemolithotrophy in the continental deep subsurface: Sanford Underground Research Facility (SURF), USA
The deep subsurface is an enormous repository of microbial life. However, the metabolic
capabilities of these microorganisms and the degree to which they are dependent on …
capabilities of these microorganisms and the degree to which they are dependent on …