The DnaA Cycle in Escherichia coli: Activation, Function and Inactivation of the Initiator Protein

T Katayama, K Kasho, H Kawakami - Frontiers in microbiology, 2017 - frontiersin.org
This review summarizes the mechanisms of the initiator protein DnaA in replication initiation
and its regulation in Escherichia coli. The chromosomal origin (oriC) DNA is unwound by the …

Helicase loading at chromosomal origins of replication

SP Bell, JM Kaguni - Cold Spring Harbor perspectives in …, 2013 - cshperspectives.cshlp.org
Loading of the replicative DNA helicase at origins of replication is of central importance in
DNA replication. As the first of the replication fork proteins assemble at chromosomal origins …

Chromosome organization by a nucleoid-associated protein in live bacteria

W Wang, GW Li, C Chen, XS Xie, X Zhuang - Science, 2011 - science.org
Bacterial chromosomes are confined in submicrometer-sized nucleoids. Chromosome
organization is facilitated by nucleoid-associated proteins (NAPs), but the mechanisms of …

Single-stranded DNA recruitment mechanism in replication origin unwinding by DnaA initiator protein and HU, an evolutionary ubiquitous nucleoid protein

R Yoshida, S Ozaki, H Kawakami… - Nucleic acids …, 2023 - academic.oup.com
The Escherichia coli replication origin oriC contains the initiator ATP-DnaA-Oligomerization
Region (DOR) and its flanking duplex unwinding element (DUE). In the Left-DOR subregion …

oriC-encoded instructions for the initiation of bacterial chromosome replication

M Wolański, R Donczew, A Zawilak-Pawlik… - Frontiers in …, 2015 - frontiersin.org
Replication of the bacterial chromosome initiates at a single origin of replication that is
called oriC. This occurs via the concerted action of numerous proteins, including DnaA …

Architecture and conservation of the bacterial DNA replication machinery, an underexploited drug target

A Robinson, R J. Causer, N E. Dixon - Current drug targets, 2012 - benthamdirect.com
New antibiotics with novel modes of action are required to combat the growing threat posed
by multi-drug resistant bacteria. Over the last decade, genome sequencing and other high …

Replication initiation at the Escherichia coli chromosomal origin

JM Kaguni - Current opinion in chemical biology, 2011 - Elsevier
To initiate DNA replication, DnaA recognizes and binds to specific sequences within the
Escherichia coli chromosomal origin (oriC), and then unwinds a region within oriC. Next …

Regulation of DnaA assembly and activity: taking directions from the genome

AC Leonard, JE Grimwade - Annual review of microbiology, 2011 - annualreviews.org
To ensure proper timing of chromosome duplication during the cell cycle, bacteria must
carefully regulate the activity of initiator protein DnaA and its interactions with the unique …

Highly organized DnaA– oriC complexes recruit the single-stranded DNA for replication initiation

S Ozaki, T Katayama - Nucleic acids research, 2012 - academic.oup.com
In Escherichia coli, the replication origin oriC consists of two functional regions: the duplex
unwinding element (DUE) and its flanking DnaA-assembly region (DAR). ATP-DnaA …

Function of nucleoid-associated proteins in chromosome structuring and transcriptional regulation

CJ Dorman - Journal of molecular microbiology and biotechnology, 2014 - karger.com
Nucleoid-associated proteins typically are abundant, low-molecular-mass polypeptides that
bind DNA and alter its shape and its ability to participate in transactions such as …