DNA methylation pathways and their crosstalk with histone methylation

J Du, LM Johnson, SE Jacobsen… - Nature reviews Molecular …, 2015 - nature.com
Methylation of DNA and of histone 3 at Lys 9 (H3K9) are highly correlated with gene
silencing in eukaryotes from fungi to humans. Both of these epigenetic marks need to be …

Inherited epigenetic variation—revisiting soft inheritance

EJ Richards - Nature Reviews Genetics, 2006 - nature.com
Phenotypic variation is traditionally parsed into components that are directed by genetic and
environmental variation. The line between these two components is blurred by inherited …

[HTML][HTML] Cellular memory and the histone code

BM Turner - Cell, 2002 - cell.com
The histone tails on the nucleosome surface are subject to enzyme-catalyzed modifications
that may, singly or in combination, form a code specifying patterns of gene expression …

Epigenetic gene regulation in the bacterial world

J Casadesús, D Low - Microbiology and molecular biology …, 2006 - Am Soc Microbiol
Like many eukaryotes, bacteria make widespread use of postreplicative DNA methylation for
the epigenetic control of DNA-protein interactions. Unlike eukaryotes, however, bacteria use …

Lessons from the Genome Sequence of Neurospora crassa: Tracing the Path from Genomic Blueprint to Multicellular Organism

KA Borkovich, LA Alex, O Yarden… - Microbiology and …, 2004 - Am Soc Microbiol
We present an analysis of over 1,100 of the∼ 10,000 predicted proteins encoded by the
genome sequence of the filamentous fungus Neurospora crassa. Seven major areas of …

RIP: the evolutionary cost of genome defense

JE Galagan, EU Selker - TRENDS in Genetics, 2004 - cell.com
Repeat-induced point mutation (RIP) is a homology-based process that mutates repetitive
DNA and frequently leads to epigenetic silencing of the mutated sequences through DNA …

Epigenetics—an epicenter of gene regulation: histones and histone‐modifying enzymes

M Biel, V Wascholowski… - Angewandte Chemie …, 2005 - Wiley Online Library
The treatment of cancer through the development of new therapies is one of the most
important challenges of our time. The decoding of the human genome has yielded important …

Regulation of secondary metabolism by chromatin structure and epigenetic codes

J Strauss, Y Reyes-Dominguez - Fungal Genetics and Biology, 2011 - Elsevier
Chromatin, composed of DNA wrapped around an octamer of histones, is the relevant
substrate for all genetic processes in eukaryotic nuclei. Changes in chromatin structure are …

Sexual stage–specific A-to-I mRNA editing is mediated by tRNA-editing enzymes in fungi

Z Bian, Z Wang, D Wang, JR Xu - Proceedings of the …, 2024 - National Acad Sciences
A-to-I RNA editing catalyzed by adenosine-deaminase-acting-on-RNA (ADARs) was
assumed to be unique to metazoans because fungi and plants lack ADAR homologs …

Neurospora crassa, a model system for epigenetics research

R Aramayo, EU Selker - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
The filamentous fungus Neurospora crassa has provided a rich source of knowledge on
epigenetic phenomena that would have been difficult or impossible to gain from other …