scPerturb: harmonized single-cell perturbation data
Abstract Analysis across a growing number of single-cell perturbation datasets is hampered
by poor data interoperability. To facilitate development and benchmarking of computational …
by poor data interoperability. To facilitate development and benchmarking of computational …
[HTML][HTML] A mini-review on perturbation modelling across single-cell omic modalities
GI Gavriilidis, V Vasileiou, A Orfanou, N Ishaque… - Computational and …, 2024 - Elsevier
Recent advances in single-cell omics technology have transformed the landscape of cellular
and molecular research, enriching the scope and intricacy of cellular characterisation …
and molecular research, enriching the scope and intricacy of cellular characterisation …
Pertpy: an end-to-end framework for perturbation analysis
Advances in single-cell technology have enabled the measurement of cell-resolved
molecular states across a variety of cell lines and tissues under a plethora of genetic …
molecular states across a variety of cell lines and tissues under a plethora of genetic …
MLBKFD: Probabilistic Model Methods to Infer Pseudo Trajectories from Single-cell Data
C Han, W Cao, C Li, Y Guo, Y Wang… - Journal of …, 2024 - ui.adsabs.harvard.edu
Cell trajectory inference is very important to understand the details of tissue cell
development, state differentiation and gene dynamic regulation. However, due to the high …
development, state differentiation and gene dynamic regulation. However, due to the high …
Advancements in computational modelling of biological systems: seventh annual SysMod meeting
Abstract Summary The Computational Modelling of Systems Biology (SysMod) Community
of Special Interest (COSI) convenes annually at the Intelligent Systems for Molecular Biology …
of Special Interest (COSI) convenes annually at the Intelligent Systems for Molecular Biology …