A practical guide to environmental association analysis in landscape genomics

C Rellstab, F Gugerli, AJ Eckert, AM Hancock… - Molecular …, 2015 - Wiley Online Library
Landscape genomics is an emerging research field that aims to identify the environmental
factors that shape adaptive genetic variation and the gene variants that drive local …

[HTML][HTML] High-throughput SNP genotyping to accelerate crop improvement

MJ Thomson - Plant Breeding and Biotechnology, 2014 - plantbreedbio.org
Recent advances in next-generation sequencing (NGS) and single nucleotide
polymorphism (SNP) genotyping promise to greatly accelerate crop improvement if properly …

[HTML][HTML] Molecular marker development and gene cloning for diverse disease resistance in pepper (Capsicum annuum L.): current status and prospects

GD Barka, J Lee - Plant breeding and biotechnology, 2020 - plantbreedbio.org
The production of chili pepper (Capsicum annuum L.) is hindered by several biotic factors
even though striding progresses were made in genetic improvement in the last two decades …

[HTML][HTML] Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics

AJ McDonnell, WJ Baker, S Dodsworth… - Applications in Plant …, 2021 - ncbi.nlm.nih.gov
Applications in Plant Sciences 2021 9 (7): e11443; http://www. wileyonlinelibrary.
com/journal/AppsPlantSci© 2021 McDonnell et al. Applications in Plant Sciences published …

Microfluidic PCR‐based target enrichment: A case study in two rapid radiations of Commiphora (Burseraceae) from Madagascar

MR Gostel, KA Coy, A Weeks - Journal of Systematics and …, 2015 - Wiley Online Library
Developing effective and cost‐efficient multilocus nuclear datasets for angiosperm species
is a continuing challenge to the systematics community. Here we describe the development …

Effective plant virus enrichment using carbon nanotubes and microfluidics

NP Lopez, JFI Martinez, C Vosburg, EG Rajotte… - Journal of Virological …, 2024 - Elsevier
Plant virus detection and identification in crops is a pillar for disease management, import of
crop material, production of clean stock plants and basic plant virology studies. In this report …

Next-generation sequencing of elite berry germplasm and data analysis using a bioinformatics pipeline for virus detection and discovery

T Ho, RR Martin, IE Tzanetakis - Plant Pathology: Techniques and …, 2015 - Springer
Berry crops (members of the genera Fragaria, Ribes, Rubus, Sambucus, and Vaccinium) are
known hosts for more than 70 viruses and new ones are identified continually. In modern …

Method for measuring mutation rate

S Jeong, AOH Soo - US Patent 11,959,131, 2024 - Google Patents
The present invention relates to a method for measuring a mutation rate, comprising
preparing a library for next generation sequencing (NGS). Accordingly, the present invention …