Characterization of the human Ig heavy chain antigen binding complementarity determining region 3 using a newly developed software algorithm, JOINSOLVER

MM Souto-Carneiro, NS Longo, DE Russ… - The Journal of …, 2004 - journals.aai.org
We analyzed 77 nonproductive and 574 productive human VH DJ H rearrangements with a
newly developed program, JOINSOLVER. In the productive repertoire, the H chain …

The immunoglobulin IGHD gene locus in C57BL/6 mice

J Ye - Immunogenetics, 2004 - Springer
Four immunoglobulin heavy chain diversity (IGHD) gene subgroups (DFL16, DSP2, DQ52,
and DST4) have been identified previously in BALB/c mice. Although the locations of most …

Paucity of VDDJ rearrangements and VH replacement events in lupus prone and nonautoimmune TdT−/− and TdT+/+ mice

LC Watson, CS Moffatt-Blue, RZ McDonald… - The Journal of …, 2006 - journals.aai.org
CDR3 regions containing two D segments, or containing the footprints of VH replacement
events, have been reported in both mice and humans. However, the 12–23 bp rule for V (D) …

Organization of DH-gene locus is distinct in cattle

M Koti, G Kataeva, AK Kaushik - Animal Genomics for Animal Health, 2008 - karger.com
Some cattle antibodies are amongst the largest known to exist, in a species where CDR3 of
the heavy-chain variable region (CDR3H) is of exceptional size as it may extend up to 61 …

Evidence for Selective Transformation of Autoreactive Immature Plasma Cells in Mice Deficient in Fasl

JQ Zhang, C Okumura, T McCarty, MS Shin… - The Journal of …, 2004 - rupress.org
Germline mutations in Fas and Fasl induce nonmalignant T cell hyperplasia and systemic
autoimmunity and also greatly increase the risk of B cell neoplasms. B lymphomas occurring …

enclone: precision clonotyping and analysis of immune receptors

DB Jaffe, P Shahi, BA Adams, AM Chrisman… - bioRxiv, 2022 - biorxiv.org
Half a billion years of evolutionary battle forged the vertebrate adaptive immune system, an
astonishingly versatile factory for molecules that can adapt to arbitrary attacks. The history of …

Adult lupus-prone MRL/MpJ2+ mice express a primary antibody repertoire that differs in CDR-H3 length distribution and hydrophobicity from that expressed in the …

M Zemlin, GC Ippolito, C Zemlin, J Link… - Molecular …, 2005 - Elsevier
Anti-dsDNA antibodies tend to be enriched for heavy chain complementarity determining
region 3 (CDR-H3) intervals of above average length that contain an increased frequency of …

The role of apoptosis in autoantibody production

R Herrera-Esparza, D Herrera-van-Oostdam… - Reumatismo, 2007 - reumatismo.org
In normal conditions, the intracellular autoantigens reach the cell surface by apoptosis and
are normally cleared by phagocytes without inflammation, nevertheless the lack of …

Regulation of basement membrane-reactive B cells in BXSB,(NZBxNZW) F1, NZB, and MRL/lpr lupus mice

AG Clark, Q Fan, GF Brady, KM Mackin… - …, 2013 - Taylor & Francis
Autoantibodies to diverse antigens escape regulation in systemic lupus erythematosus
under the influence of a multitude of predisposing genes. To gain insight into the differential …

Persistent expression of an unproductive immunoglobulin heavy chain allele with DH‐JH‐γ configuration in peripheral tissues

M Ono, M Nose - Apmis, 2007 - Wiley Online Library
Genomic recombination events, including VDJ recombination (VDJR) and class‐switch
recombination (CSR), are indispensable for the adaptation and progression of the acquired …