Evolutionary pathways and trajectories in antibiotic resistance
Evolution is the hallmark of life. Descriptions of the evolution of microorganisms have
provided a wealth of information, but knowledge regarding “what happened” has precluded …
provided a wealth of information, but knowledge regarding “what happened” has precluded …
Using phenotypic plasticity to understand the structure and evolution of the genotype–phenotype map
Deciphering the genotype–phenotype map necessitates relating variation at the genetic
level to variation at the phenotypic level. This endeavour is inherently limited by the …
level to variation at the phenotypic level. This endeavour is inherently limited by the …
[HTML][HTML] Genotype by environment interaction for gene expression in Drosophila melanogaster
The genetics of phenotypic responses to changing environments remains elusive. Using
whole-genome quantitative gene expression as a model, here we study how the genetic …
whole-genome quantitative gene expression as a model, here we study how the genetic …
On the effects of the modularity of gene regulatory networks on phenotypic variability and its association with robustness
U Hernández, L Posadas-Vidales, C Espinosa-Soto - Biosystems, 2022 - Elsevier
Biological adaptations depend on natural selection sorting out those individuals that exhibit
characters fit to their environment. Selection, in turn, depends on the phenotypic variation …
characters fit to their environment. Selection, in turn, depends on the phenotypic variation …
Computational modelling of plasticity-led evolution
ETH Ng, AR Kinjo - Biophysical Reviews, 2022 - Springer
Plasticity-led evolution is a form of evolution where a change in the environment induces
novel traits via phenotypic plasticity, after which the novel traits are genetically …
novel traits via phenotypic plasticity, after which the novel traits are genetically …
Correlated stabilizing selection shapes the topology of gene regulatory networks
AJR Petit, J Guez, A Le Rouzic - Genetics, 2023 - academic.oup.com
The evolution of gene expression is constrained by the topology of gene regulatory
networks, as co-expressed genes are likely to have their expressions affected together by …
networks, as co-expressed genes are likely to have their expressions affected together by …
[HTML][HTML] Evolution enhances mutational robustness and suppresses the emergence of a new phenotype: A new computational approach for studying evolution
T Kaneko, M Kikuchi - PLOS Computational Biology, 2022 - journals.plos.org
The aim of this paper is two-fold. First, we propose a new computational method to
investigate the particularities of evolution. Second, we apply this method to a model of gene …
investigate the particularities of evolution. Second, we apply this method to a model of gene …
[HTML][HTML] La ecología evolutiva del desarrollo en México
ER Álvarez-Buylla, A Garay-Arroyo… - Revista mexicana de …, 2017 - scielo.org.mx
La biología evolutiva se enfoca al estudio de los patrones de variación fenotípica
heredables dentro de las poblaciones y su dinámica en tiempos transgeneracionales …
heredables dentro de las poblaciones y su dinámica en tiempos transgeneracionales …
[HTML][HTML] Early effects of gene duplication on the robustness and phenotypic variability of gene regulatory networks
YS Posadas-García, C Espinosa-Soto - BMC bioinformatics, 2022 - Springer
Background Research on gene duplication is abundant and comes from a wide range of
approaches, from high-throughput analyses and experimental evolution to bioinformatics …
approaches, from high-throughput analyses and experimental evolution to bioinformatics …
Convergence Analysis and Network Properties of Wagner's Artificial Gene Regulatory Network Model
Y Wang - Journal of Advances in Mathematics and …, 2019 - info.stmdigitallibrary.com
The gene regulatory network (GRN) is essential to life, as it governs all levels of gene
products that enable cell survival and numerous cellular functions. Wagner's GRN model …
products that enable cell survival and numerous cellular functions. Wagner's GRN model …