Discovery of digestive enzymes in carnivorous plants with focus on proteases
R Ravee, FIM Salleh, HH Goh - PeerJ, 2018 - peerj.com
Background Carnivorous plants have been fascinating researchers with their unique
characters and bioinspired applications. These include medicinal trait of some carnivorous …
characters and bioinspired applications. These include medicinal trait of some carnivorous …
Omics approaches in uncovering molecular evolution and physiology of botanical carnivory
Systems biology has been increasingly applied with multiple omics for a holistic
comprehension of complex biological systems beyond the reductionist approach that …
comprehension of complex biological systems beyond the reductionist approach that …
Sequence characterization and molecular modeling of clinically relevant variants of the SARS-CoV-2 main protease
The SARS-CoV-2 main protease (M pro) is essential to viral replication and cleaves highly
specific substrate sequences, making it an obvious target for inhibitor design. However, as …
specific substrate sequences, making it an obvious target for inhibitor design. However, as …
Comparative exploratory analysis of intrinsically disordered protein dynamics using machine learning and network analytic methods
Simulations of intrinsically disordered proteins (IDPs) pose numerous challenges to
comparative analysis, prominently including highly dynamic conformational states and a …
comparative analysis, prominently including highly dynamic conformational states and a …
Highly scalable maximum likelihood and conjugate Bayesian inference for ERGMs on graph sets with equivalent vertices
The exponential family random graph modeling (ERGM) framework provides a highly
flexible approach for the statistical analysis of networks (ie, graphs). As ERGMs with dyadic …
flexible approach for the statistical analysis of networks (ie, graphs). As ERGMs with dyadic …
Finite mixtures of ERGMS for modeling ensembles of networks
Finite Mixtures of ERGMs for Modeling Ensembles of Networks Page 1 Bayesian Analysis (2022)
17, Number 4, pp. 1153–1191 Finite Mixtures of ERGMs for Modeling Ensembles of Networks …
17, Number 4, pp. 1153–1191 Finite Mixtures of ERGMs for Modeling Ensembles of Networks …
Biochemical and antifungal characteristics of recombinant class I chitinase from Drosera rotundifolia
M Rajninec, M Jopcik, M Danchenko… - International Journal of …, 2020 - Elsevier
DrChit is class I chitinase involved in the digestion of insect prey of Drosera rotundifolia
plants. Herein, we cloned the DrChit-S open reading frame lacking the 5′-sequence coding …
plants. Herein, we cloned the DrChit-S open reading frame lacking the 5′-sequence coding …
Network Hamiltonian models for unstructured protein aggregates, with application to γD-Crystallin
Network Hamiltonian models (NHMs) are a framework for topological coarse-graining of
protein–protein interactions, in which each node corresponds to a protein, and edges are …
protein–protein interactions, in which each node corresponds to a protein, and edges are …
Neural upscaling from residue-level protein structure networks to atomistic structures
Coarse-graining is a powerful tool for extending the reach of dynamic models of proteins
and other biological macromolecules. Topological coarse-graining, in which biomolecules …
and other biological macromolecules. Topological coarse-graining, in which biomolecules …
The Droserasin 1 PSI: A Membrane-Interacting Antimicrobial Peptide from the Carnivorous Plant Drosera capensis
MA Sprague-Piercy, JC Bierma, MG Crosby… - Biomolecules, 2020 - mdpi.com
The Droserasins, aspartic proteases from the carnivorous plant Drosera capensis, contain a
100-residue plant-specific insert (PSI) that is post-translationally cleaved and independently …
100-residue plant-specific insert (PSI) that is post-translationally cleaved and independently …