The DnaA tale

FG Hansen, T Atlung - Frontiers in microbiology, 2018 - frontiersin.org
More than 50 years have passed since the presentation of the Replicon Model which states
that a positively acting initiator interacts with a specific site on a circular chromosome …

Countermeasures to survive excessive chromosome replication in Escherichia coli

G Charbon, L Riber, A Løbner-Olesen - Current genetics, 2018 - Springer
In Escherichia coli, like all organisms, DNA replication is coordinated with cell cycle
progression to ensure duplication of the genome prior to cell division. Chromosome …

The Arg fingers of key DnaA protomers are oriented inward within the replication origin oriC and stimulate DnaA subcomplexes in the initiation complex

Y Noguchi, Y Sakiyama, H Kawakami… - Journal of Biological …, 2015 - ASBMB
ATP-DnaA binds to multiple DnaA boxes in the Escherichia coli replication origin (oriC) and
forms left-half and right-half subcomplexes that promote DNA unwinding and DnaB helicase …

Re-wiring of energy metabolism promotes viability during hyperreplication stress in E. coli

G Charbon, C Campion, SHJ Chan, L Bjørn… - PLoS …, 2017 - journals.plos.org
Chromosome replication in Escherichia coli is initiated by DnaA. DnaA binds ATP which is
essential for formation of a DnaA-oriC nucleoprotein complex that promotes strand opening …

Structure and kinase activity of bacterial cell cycle regulator CcrZ

KJ Wozniak, PE Burby, J Nandakumar… - PLoS …, 2022 - journals.plos.org
CcrZ is a recently discovered cell cycle regulator that connects DNA replication initiation with
cell division in pneumococci and may have a similar function in related bacteria. CcrZ is also …

Dynamic assembly of Hda and the sliding clamp in the regulation of replication licensing

JS Kim, MT Nanfara, S Chodavarapu… - Nucleic acids …, 2017 - academic.oup.com
Regulatory inactivation of DnaA (RIDA) is one of the major regulatory mechanisms of
prokaryotic replication licensing. In RIDA, the Hda–sliding clamp complex loaded onto DNA …

The Escherichia coli cryptic prophage protein YfdR binds to DnaA and initiation of chromosomal replication is inhibited by overexpression of the gene cluster yfdQ …

Y Noguchi, T Katayama - Frontiers in microbiology, 2016 - frontiersin.org
The initiation of bacterial chromosomal replication is regulated by multiple pathways. To
explore novel regulators, we isolated multicopy suppressors for the cold-sensitive hda-185 Δ …

DnaC, the indispensable companion of DnaB helicase, controls the accessibility of DnaB helicase by primase

MM Felczak, S Chodavarapu, JM Kaguni - Journal of Biological Chemistry, 2017 - ASBMB
Former studies relying on hydrogen/deuterium exchange analysis suggest that DnaC bound
to DnaB alters the conformation of the N-terminal domain (NTD) of DnaB to impair the ability …

DNA replication initiation timing is important for maintaining genome integrity

TT Reed, AH Kendal, KJ Wozniak, LA Simmons - bioRxiv, 2024 - biorxiv.org
DNA replication is regulated by factors that promote or inhibit initiation. In Bacillus subtilis,
YabA is a negative regulator of DNA replication initiation while the newly identified kinase …

Elevated Levels of the Escherichia coli nrdAB-Encoded Ribonucleotide Reductase Counteract the Toxicity Caused by an Increased Abundance of the β Clamp

VMP Babu, C Homiski, MK Scotland… - Journal of …, 2021 - Am Soc Microbiol
Expression of the Escherichia coli dnaN-encoded β clamp at≥ 10-fold higher than
chromosomally expressed levels impedes growth by interfering with DNA replication. A …