New Insights into the Cooperativity and Dynamics of Dimeric Enzymes

KW Chen, TY Sun, YD Wu - Chemical Reviews, 2023 - ACS Publications
A survey of protein databases indicates that the majority of enzymes exist in oligomeric
forms, with about half of those found in the UniProt database being homodimeric …

Empowering drug off-target discovery with metabolic and structural analysis

S Chowdhury, DC Zielinski, C Dalldorf… - Nature …, 2023 - nature.com
Elucidating intracellular drug targets is a difficult problem. While machine learning analysis
of omics data has been a promising approach, going from large-scale trends to specific …

Development of antibacterial compounds that constrain evolutionary pathways to resistance

Y Zhang, S Chowdhury, JV Rodrigues, E Shakhnovich - Elife, 2021 - elifesciences.org
Antibiotic resistance is a worldwide challenge. A potential approach to block resistance is to
simultaneously inhibit WT and known escape variants of the target bacterial protein. Here …

Combining systems and synthetic biology for in vivo enzymology

S Castaño-Cerezo, A Chamas, H Kulyk, C Treitz… - The EMBO …, 2024 - embopress.org
Enzymatic parameters are classically determined in vitro, under conditions that are far from
those encountered in cells, casting doubt on their physiological relevance. We developed a …

[图书][B] Non-Destructive Material Characterization Methods

A Otsuki, S Jose, M Mohan, S Thomas - 2023 - books.google.com
Non-Destructive Material Characterization Methods provides readers with a trove of
theoretical and practical insight into how to implement different non-destructive testing …

The fitness effects of codon composition of the horizontally transferred antibiotic resistance genes intensify at sub-lethal antibiotic levels

M Shaferman, M Gencel, N Alon… - Molecular Biology …, 2023 - academic.oup.com
The rampant variability in codon bias existing between bacterial genomes is expected to
interfere with horizontal gene transfer (HGT), a phenomenon that drives bacterial adaptation …

[HTML][HTML] Patient-derived cornea organoid model to study metabolomic characterization of rare disease: aniridia-associated keratopathy

AC Koc, V Sari, G Kocak… - BMC …, 2025 - bmcophthalmol.biomedcentral.com
Aniridia is a rare panocular disease caused by gene mutation in the PAX6, which is
essential for eye development. Aniridia is inherited in an autosomal dominant manner, but …

UV–Vis spectroscopy in non-destructive testing

K Khalid, R Ishak, ZZ Chowdhury - Non-Destructive Material …, 2024 - Elsevier
Non-destructive testing (NDT) is an analysis technique used by industry to evaluate the
properties of a material, component, structure, or system for characteristic differences or …

[PDF][PDF] A systems-guided approach to discover the intracellular target of a novel evolution-drug lead

S Chowdhury, DC Zielinski, C Dalldorf, JV Rodrigues… - bioRxiv, 2021 - scholar.archive.org
Understanding intracellular antibiotic targeting and the associated mechanisms leading to
bacterial growth inhibition has been a difficult problem. Here, we discovered the additional …

Development of evolution drugs-antibacterial compounds that block pathways to resistance

Y Zhang, S Chowdhury, JV Rodrigues, E Shakhnovich - bioRxiv, 2020 - biorxiv.org
Antibiotic resistance is a worldwide challenge. A potential approach to block resistance is to
simultaneously inhibit WT and known escape variants of the target bacterial protein. Here …