The importance of individuals: intraspecific diversity of mycorrhizal plants and fungi in ecosystems

D Johnson, F Martin, JWG Cairney… - New …, 2012 - Wiley Online Library
A key component of biodiversity is the number and abundance of individuals (ie genotypes),
and yet such intraspecific diversity is rarely considered when investigating the effects of …

Genetic linkage mapping in fungi: current state, applications, and future trends

M Foulongne-Oriol - Applied Microbiology and Biotechnology, 2012 - Springer
Genetic mapping is a basic tool for eukaryotic genomic research. Linkage maps provide
insights into genome organization and can be used for genetic studies of traits of interest. A …

[HTML][HTML] Whole genome sequence of an edible and medicinal mushroom, Hericium erinaceus (Basidiomycota, Fungi)

W Gong, Y Wang, C Xie, Y Zhou, Z Zhu, Y Peng - Genomics, 2020 - Elsevier
Hericium erinaceus is a well-known culinary and medicinal mushroom in China. The
biological and genetic studies on this mushroom is rare, thereby hindering the breeding of …

[HTML][HTML] Genome Wide Characterization of Short Tandem Repeat Markers in Sweet Orange (Citrus sinensis)

MK Biswas, Q Xu, C Mayer, X Deng - PloS one, 2014 - journals.plos.org
Sweet orange (Citrus sinensis) is one of the major cultivated and most-consumed citrus
species. With the goal of enhancing the genomic resources in citrus, we surveyed …

[HTML][HTML] Genome-wide survey and analysis of microsatellites in giant panda (Ailuropoda melanoleuca), with a focus on the applications of a novel microsatellite …

J Huang, YZ Li, LM Du, B Yang, FJ Shen, HM Zhang… - BMC genomics, 2015 - Springer
Abstract Background The giant panda (Ailuropoda melanoleuca) is a critically endangered
species endemic to China. Microsatellites have been preferred as the most popular …

A molecular toolkit for population genetic investigations of the ash dieback pathogen Hymenoscyphus pseudoalbidus

A Gross, CR Grünig, V Queloz… - Forest …, 2012 - Wiley Online Library
The recently described ascomycete fungus Hymenoscyphus pseudoalbidus (anamorph:
Chalara fraxinea) causes the current dieback of ash (Fraxinus excelsior) in large parts of …

Genome-wide analysis of simple sequence repeats in the model medicinal mushroom Ganoderma lucidum

J Qian, H Xu, J Song, J Xu, Y Zhu, S Chen - Gene, 2013 - Elsevier
Simple sequence repeats (SSRs) or microsatellites are one of the most popular sources of
genetic markers and play a significant role in gene function and genome organization. We …

[HTML][HTML] Transcriptome wide SSR discovery cross-taxa transferability and development of marker database for studying genetic diversity population structure of Lilium …

MK Biswas, M Bagchi, UK Nath, D Biswas… - Scientific reports, 2020 - nature.com
Lily belongs to family liliaceae, which mainly propagates vegetatively. Therefore, sufficient
number of polymorphic, informative, and functional molecular markers are essential for …

[HTML][HTML] The Genetic Structure of Phellinus noxius and Dissemination Pattern of Brown Root Rot Disease in Taiwan

CL Chung, SY Huang, YC Huang, SS Tzean, PJ Ann… - PLoS …, 2015 - journals.plos.org
Since the 1990s, brown root rot caused by Phellinus noxius (Corner) Cunningham has
become a major tree disease in Taiwan. This fungal pathogen can infect more than 200 …

Exploiting BAC-end sequences for the mining, characterization and utility of new short sequences repeat (SSR) markers in Citrus

MK Biswas, L Chai, C Mayer, Q Xu, W Guo… - Molecular Biology …, 2012 - Springer
The aim of this study was to develop a large set of microsatellite markers based on publicly
available BAC-end sequences (BESs), and to evaluate their transferability, discriminating …