T cell antigen receptor recognition of antigen-presenting molecules

J Rossjohn, S Gras, JJ Miles, SJ Turner… - Annual review of …, 2015 - annualreviews.org
The Major Histocompatibility Complex (MHC) locus encodes classical MHC class I and MHC
class II molecules and nonclassical MHC-I molecules. The architecture of these molecules is …

[HTML][HTML] TCR recognition of peptide–MHC-I: Rule makers and breakers

C Szeto, CA Lobos, AT Nguyen, S Gras - International journal of …, 2020 - mdpi.com
T cells are a critical part of the adaptive immune system that are able to distinguish between
healthy and unhealthy cells. Upon recognition of protein fragments (peptides), activated T …

VDJdb: a curated database of T-cell receptor sequences with known antigen specificity

M Shugay, DV Bagaev, IV Zvyagin… - Nucleic acids …, 2018 - academic.oup.com
The ability to decode antigen specificities encapsulated in the sequences of rearranged T-
cell receptor (TCR) genes is critical for our understanding of the adaptive immune system …

Avoiding false positive conclusions in molecular simulation: the importance of replicas

B Knapp, L Ospina, CM Deane - Journal of Chemical Theory and …, 2018 - ACS Publications
Molecular simulations are a computational technique used to investigate the dynamics of
proteins and other molecules. The free energy landscape of these simulations is often …

Understanding the drivers of MHC restriction of T cell receptors

NL La Gruta, S Gras, SR Daley, PG Thomas… - Nature Reviews …, 2018 - nature.com
T cell discrimination of self and non-self is predicated on αβ T cell receptor (TCR) co-
recognition of peptides presented by MHC molecules. Over the past 20 years, structurally …

Cell biology of T cell receptor expression and regulation

A Alcover, B Alarcón, V Di Bartolo - Annual review of …, 2018 - annualreviews.org
T cell receptors (TCRs) are protein complexes formed by six different polypeptides. In most T
cells, TCRs are composed of αβ subunits displaying immunoglobulin-like variable domains …

Antigen-loaded MR1 tetramers define T cell receptor heterogeneity in mucosal-associated invariant T cells

R Reantragoon, AJ Corbett, IG Sakala… - Journal of Experimental …, 2013 - rupress.org
Mucosal-associated invariant T cells (MAIT cells) express a semi-invariant T cell receptor
(TCR) α-chain, TRAV1-2–TRAJ33, and are activated by vitamin B metabolites bound by the …

Insights into the initiation of TCR signaling

AK Chakraborty, A Weiss - Nature immunology, 2014 - nature.com
The initiation of T cell antigen receptor signaling is a key step that can result in T cell
activation and the orchestration of an adaptive immune response. Early events in T cell …

How TCRs bind MHCs, peptides, and coreceptors

MG Rudolph, RL Stanfield, IA Wilson - Annu. Rev. Immunol., 2006 - annualreviews.org
Since the first crystal structure determinations of αβ T cell receptors (TCRs) bound to class I
MHC-peptide (pMHC) antigens in 1996, a sizable database of 24 class I and class II …

Mechanisms for T cell receptor triggering

PA Van Der Merwe, O Dushek - Nature Reviews Immunology, 2011 - nature.com
There is considerable controversy about the mechanism of T cell receptor (TCR) triggering,
the process by which the TCR tranduces signals across the plasma membrane after binding …