Epigenetics and allergy: from basic mechanisms to clinical applications
DP Potaczek, H Harb, S Michel, BA Alhamwe… - …, 2017 - Future Medicine
Allergic diseases are on the rise in the Western world and well-known allergy-protecting and-
driving factors such as microbial and dietary exposure, pollution and smoking mediate their …
driving factors such as microbial and dietary exposure, pollution and smoking mediate their …
Cell-type deconvolution from DNA methylation: a review of recent applications
Recent advances in cell-type deconvolution approaches are adding to our understanding of
the biology underlying disease development and progression. DNA methylation (DNAm) …
the biology underlying disease development and progression. DNA methylation (DNAm) …
[HTML][HTML] Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling
DNA methylation microarrays can be employed to interrogate cell-type composition in
complex tissues. Here, we expand reference-based deconvolution of blood DNA …
complex tissues. Here, we expand reference-based deconvolution of blood DNA …
[HTML][HTML] An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BeadArray
Genome-wide methylation arrays are powerful tools for assessing cell composition of
complex mixtures. We compare three approaches to select reference libraries for …
complex mixtures. We compare three approaches to select reference libraries for …
Meffil: efficient normalization and analysis of very large DNA methylation datasets
Motivation DNA methylation datasets are growing ever larger both in sample size and
genome coverage. Novel computational solutions are required to efficiently handle these …
genome coverage. Novel computational solutions are required to efficiently handle these …
Maternal BMI at the start of pregnancy and offspring epigenome-wide DNA methylation: findings from the pregnancy and childhood epigenetics (PACE) consortium
GC Sharp, LA Salas, C Monnereau… - Human molecular …, 2017 - academic.oup.com
Pre-pregnancy maternal obesity is associated with adverse offspring outcomes at birth and
later in life. Individual studies have shown that epigenetic modifications such as DNA …
later in life. Individual studies have shown that epigenetic modifications such as DNA …
[HTML][HTML] Meta-analysis of epigenome-wide association studies in neonates reveals widespread differential DNA methylation associated with birthweight
Birthweight is associated with health outcomes across the life course, DNA methylation may
be an underlying mechanism. In this meta-analysis of epigenome-wide association studies …
be an underlying mechanism. In this meta-analysis of epigenome-wide association studies …
Cell-type deconvolution in epigenome-wide association studies: a review and recommendations
AE Teschendorff, SC Zheng - Epigenomics, 2017 - Future Medicine
A major challenge faced by epigenome-wide association studies (EWAS) is cell-type
heterogeneity. As many EWAS have already demonstrated, adjusting for changes in cell …
heterogeneity. As many EWAS have already demonstrated, adjusting for changes in cell …
Cohort profile: pregnancy and childhood epigenetics (PACE) consortium
JF Felix, BR Joubert, AA Baccarelli… - International journal …, 2018 - academic.oup.com
Epigenetics refers to mitotically heritable changes to the DNA, which do not affect the DNA
sequence, but can influence its function. Currently, DNA methylation is the most studied …
sequence, but can influence its function. Currently, DNA methylation is the most studied …
[HTML][HTML] Systematic evaluation and validation of reference and library selection methods for deconvolution of cord blood DNA methylation data
Background Umbilical cord blood (UCB) is commonly used in epigenome-wide association
studies of prenatal exposures. Accounting for cell type composition is critical in such studies …
studies of prenatal exposures. Accounting for cell type composition is critical in such studies …