Proteomics turns functional

C Monti, M Zilocchi, I Colugnat, T Alberio - Journal of proteomics, 2019 - Elsevier
Proteomics is acquiring a pivotal role in the comprehensive understanding of human
biology. Biochemical processes involved in complex diseases, such as neurodegenerative …

[HTML][HTML] A high-resolution map of human RNA translation

SP Chothani, E Adami, AA Widjaja, SR Langley… - Molecular cell, 2022 - cell.com
Translated small open reading frames (smORFs) can have important regulatory roles and
encode microproteins, yet their genome-wide identification has been challenging. We …

An overview on enrichment methods for cell surface proteome profiling

Y Li, H Qin, M Ye - Journal of separation science, 2020 - Wiley Online Library
Cell surface proteins are essential for many important biological processes, including cell–
cell interactions, signal transduction, and molecular transportation. With the characteristics of …

Proteomic profiling of mesenchymal stem cell‐derived extracellular vesicles: Impact of isolation methods on protein cargo

M Abyadeh, S Mirshahvaladi… - Journal of …, 2024 - Wiley Online Library
Extracellular vesicles (EVs) are nanosized vesicles with a lipid bilayer that are secreted by
cells and play a critical role in cell‐to‐cell communication. Despite the promising reports …

The quest of cell surface markers for stem cell therapy

A Meyfour, S Pahlavan, M Mirzaei, J Krijgsveld… - Cellular and Molecular …, 2021 - Springer
Stem cells and their derivatives are novel pharmaceutics that have the potential for use as
tissue replacement therapies. However, the heterogeneous characteristics of stem cell …

Subcellular proteome landscape of human embryonic stem cells revealed missing membrane proteins

MM Weldemariam, CL Han, F Shekari… - Journal of Proteome …, 2018 - ACS Publications
Human embryonic stem cells (hESCs) have the capacity for self-renewal and multilineage
differentiation, which are of clinical importance for regeneration medicine. Despite the …

Mitochondrial proteome profiling of Leishmania tropica

M Tasbihi, F Shekari, H Hajjaran, L Masoori… - Microbial …, 2019 - Elsevier
The mitochondrion of kinetoplastida has unique characteristics both in structure and
function. To better understand the mitochondrial proteome of the Leishmania tropica …

Surface markers of human embryonic stem cells: a meta analysis of membrane proteomics reports

F Shekari, CL Han, J Lee, M Mirzaei… - Expert Review of …, 2018 - Taylor & Francis
Introduction: Human embryonic stem cells (hESCs) have unique biological features and
attributes that make them attractive in various areas of biomedical research. With heightened …

[HTML][HTML] Spinal cord injury affects gene expression of transmembrane proteins in tissue and release of extracellular vesicle in blood: in silico and in vivo analysis

Y Mirzaalikhan, N Eslami, A Izadi, F Shekari… - Cell Journal …, 2023 - ncbi.nlm.nih.gov
Objective: Spinal cord injury (SCI) can disrupt membrane transmission by affecting
transmembrane channels or neurotransmitter release. This study aimed to explore gene …

Metal Organic Framework Nanomaterial-Based Extraction and Proteome Analysis of Membrane and Membrane-Associated Proteins

B Zhang, M Guo, H Wang, Z Wang, L Zhang… - Analytical …, 2021 - ACS Publications
Membrane proteins (MPs) play a key role in various biological processes, while difficulties
still exist in the extraction because of their inherent low abundance and poor solubility …