Dancing protein clouds: the strange biology and chaotic physics of intrinsically disordered proteins
VN Uversky - Journal of Biological Chemistry, 2016 - ASBMB
Biologically active but floppy proteins represent a new reality of modern protein science.
These intrinsically disordered proteins (IDPs) and hybrid proteins containing ordered and …
These intrinsically disordered proteins (IDPs) and hybrid proteins containing ordered and …
Intrinsically disordered proteins play diverse roles in cell signaling
Signaling pathways allow cells to detect and respond to a wide variety of chemical (eg Ca2+
or chemokine proteins) and physical stimuli (eg, sheer stress, light). Together, these …
or chemokine proteins) and physical stimuli (eg, sheer stress, light). Together, these …
Endoplasmic reticulum stress activates SRC, relocating chaperones to the cell surface where GRP78/CD109 blocks TGF-β signaling
The discovery that endoplasmic reticulum (ER) luminal chaperones such as GRP78/BiP can
escape to the cell surface upon ER stress where they regulate cell signaling, proliferation …
escape to the cell surface upon ER stress where they regulate cell signaling, proliferation …
Generation of the configurational ensemble of an intrinsically disordered protein from unbiased molecular dynamics simulation
UR Shrestha, P Juneja, Q Zhang… - Proceedings of the …, 2019 - National Acad Sciences
Intrinsically disordered proteins (IDPs) are abundant in eukaryotic proteomes, play a major
role in cell signaling, and are associated with human diseases. To understand IDP function it …
role in cell signaling, and are associated with human diseases. To understand IDP function it …
Intrinsically disordered proteins link alternative splicing and post-translational modifications to complex cell signaling and reulation
Intrinsically disordered regions (IDRs) make up ca. 30% of the proteome of most eukaryotes,
and are involved in a diverse set of functions. Conventional sequence alignment tools …
and are involved in a diverse set of functions. Conventional sequence alignment tools …
Order, disorder, and everything in between
S DeForte, VN Uversky - Molecules, 2016 - mdpi.com
In addition to the “traditional” proteins characterized by the unique crystal-like structures
needed for unique functions, it is increasingly recognized that many proteins or protein …
needed for unique functions, it is increasingly recognized that many proteins or protein …
[HTML][HTML] Computational prediction of MoRFs, short disorder-to-order transitioning protein binding regions
Molecular recognition features (MoRFs) are short protein-binding regions that undergo
disorder-to-order transitions (induced folding) upon binding protein partners. These regions …
disorder-to-order transitions (induced folding) upon binding protein partners. These regions …
Untapped potential of disordered proteins in current druggable human proteome
G Hu, Z Wu, K Wang, VN Uversky… - Current drug …, 2016 - ingentaconnect.com
Current efforts in design and characterization of drugs often rely on the structure of their
protein targets. However, a large fraction of proteins lack unique 3-D structures and exist as …
protein targets. However, a large fraction of proteins lack unique 3-D structures and exist as …
Galectin-1 inhibition attenuates profibrotic signaling in hypoxia-induced pulmonary fibrosis
JJ Kathiriya, N Nakra, J Nixon, PS Patel… - Cell death …, 2017 - nature.com
Idiopathic pulmonary fibrosis (IPF) is characterized by lung remodeling arising from
epithelial injury, aberrant fibroblast growth, and excessive deposition of extracellular matrix …
epithelial injury, aberrant fibroblast growth, and excessive deposition of extracellular matrix …
Survey of similarity-based prediction of drug-protein interactions
Therapeutic activity of a significant majority of drugs is determined by their interactions with
proteins. Databases of drug-protein interactions (DPIs) primarily focus on the therapeutic …
proteins. Databases of drug-protein interactions (DPIs) primarily focus on the therapeutic …