IoT, big data, and artificial intelligence in agriculture and food industry
Internet of Things (IoT) results in a massive amount of streaming data, often referred to as
“big data,” which brings new opportunities to monitor agricultural and food processes …
“big data,” which brings new opportunities to monitor agricultural and food processes …
A genomic overview of the population structure of Salmonella
For many decades, Salmonella enterica has been subdivided by serological properties into
serovars or further subdivided for epidemiological tracing by a variety of diagnostic tests with …
serovars or further subdivided for epidemiological tracing by a variety of diagnostic tests with …
[PDF][PDF] Global anaemia reduction efforts among women of reproductive age: impact, achievement of targets and the way forward for optimizing efforts
World Health Organization - 2020 - apps.who.int
Anaemia is a global public health concern, afflicting adolescent girls, women of reproductive
age, pregnant women and children in low-and middle-income countries. 1 Reduction of …
age, pregnant women and children in low-and middle-income countries. 1 Reduction of …
[HTML][HTML] Open-access bacterial population genomics: BIGSdb software, the PubMLST. org website and their applications
KA Jolley, JE Bray, MCJ Maiden - Wellcome open research, 2018 - ncbi.nlm.nih.gov
The PubMLST. org website hosts a collection of open-access, curated databases that
integrate population sequence data with provenance and phenotype information for over …
integrate population sequence data with provenance and phenotype information for over …
GrapeTree: visualization of core genomic relationships among 100,000 bacterial pathogens
Current methods struggle to reconstruct and visualize the genomic relationships of large
numbers of bacterial genomes. GrapeTree facilitates the analyses of large numbers of allelic …
numbers of bacterial genomes. GrapeTree facilitates the analyses of large numbers of allelic …
[HTML][HTML] Next-generation sequencing technologies and their application to the study and control of bacterial infections
J Besser, HA Carleton, P Gerner-Smidt… - Clinical microbiology …, 2018 - Elsevier
Background With the efficiency and the decreasing cost of next-generation sequencing, the
technology is being rapidly introduced into clinical and public health laboratory practice …
technology is being rapidly introduced into clinical and public health laboratory practice …
[HTML][HTML] Whole genome sequencing options for bacterial strain typing and epidemiologic analysis based on single nucleotide polymorphism versus gene-by-gene …
Background Whole genome sequence (WGS)-based strain typing finds increasing use in the
epidemiologic analysis of bacterial pathogens in both public health as well as more …
epidemiologic analysis of bacterial pathogens in both public health as well as more …
The use of next generation sequencing for improving food safety: Translation into practice
B Jagadeesan, P Gerner-Smidt, MW Allard, S Leuillet… - Food …, 2019 - Elsevier
Abstract Next Generation Sequencing (NGS) combined with powerful bioinformatic
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
approaches are revolutionising food microbiology. Whole genome sequencing (WGS) of …
Fast and flexible bacterial genomic epidemiology with PopPUNK
The routine use of genomics for disease surveillance provides the opportunity for high-
resolution bacterial epidemiology. Current whole-genome clustering and multilocus typing …
resolution bacterial epidemiology. Current whole-genome clustering and multilocus typing …
Shiga toxin-associated hemolytic uremic syndrome: A narrative review
A Joseph, A Cointe, P Mariani Kurkdjian, C Rafat… - Toxins, 2020 - mdpi.com
The severity of human infection by one of the many Shiga toxin-producing Escherichia coli
(STEC) is determined by a number of factors: the bacterial genome, the capacity of human …
(STEC) is determined by a number of factors: the bacterial genome, the capacity of human …