New advances in cross-linking mass spectrometry toward structural systems biology
Elucidating protein–protein interaction (PPI) networks and their structural features within
cells is central to understanding fundamental biology and associations of cell phenotypes …
cells is central to understanding fundamental biology and associations of cell phenotypes …
Chemical reagents for the enrichment of modified peptides in MS-based identification
S Huangfu, X Yu, Z Sun, B Jiang, H Chen - Chemical Communications, 2024 - pubs.rsc.org
Chemical reagents with special groups as enrichable handles have empowered the ability
to label and enrich modified peptides. Here is an overview of different chemical reagents …
to label and enrich modified peptides. Here is an overview of different chemical reagents …
Decoding Protein Dynamics in Cells Using Chemical Cross‐Linking and Hierarchical Analysis
B Zhang, Z Gong, L Zhao, Y An, H Gao… - Angewandte Chemie …, 2023 - Wiley Online Library
Protein dynamics play a crucial role in their diverse functions. The intracellular environment
significantly influences protein dynamics, particularly for intrinsically disordered proteins …
significantly influences protein dynamics, particularly for intrinsically disordered proteins …
Chemical cross-linking and mass spectrometry enabled systems-level structural biology
L Botticelli, AA Bakhtina, NK Kaiser, A Keller… - Current Opinion in …, 2024 - Elsevier
Structural information on protein–protein interactions (PPIs) is essential for improved
understanding of regulatory interactome networks that confer various physiological and …
understanding of regulatory interactome networks that confer various physiological and …
Spatially resolved profiling of protein conformation and interactions by biocompatible chemical cross-linking in living cells
Unlocking the intricacies of protein structures and interactions within the dynamic landscape
of subcellular organelles presents a significant challenge. To address this, we introduce …
of subcellular organelles presents a significant challenge. To address this, we introduce …
DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples
Protein–protein interactions (PPIs) are fundamental to understanding biological systems as
protein complexes are the active molecular modules critical for carrying out cellular …
protein complexes are the active molecular modules critical for carrying out cellular …
Progress, Challenges and Opportunities of NMR and XL-MS for Cellular Structural Biology
Z Zhang, Q Zhao, Z Gong, R Du, M Liu, Y Zhang… - JACS Au, 2024 - ACS Publications
The validity of protein structures and interactions, whether determined under ideal laboratory
conditions or predicted by AI tools such as Alphafold2, to precisely reflect those found in …
conditions or predicted by AI tools such as Alphafold2, to precisely reflect those found in …
A journey towards developing a new cleavable crosslinker reagent for in-cell crosslinking
F Mueller, BR Brutiu, I Saridakis, T Leischner… - bioRxiv, 2024 - biorxiv.org
Cross-linking mass spectrometry (XL-MS) is a powerful technology that recently emerged as
an essential complementary tool for elucidating protein structures and mapping interactions …
an essential complementary tool for elucidating protein structures and mapping interactions …
Trioxane-based MS-cleavable Cross-linking Mass Spectrometry for Profiling Multimeric Interactions of Cellular Networks
Cross-linking mass spectrometry (XL-MS) is a powerful technology for mapping protein-
protein interactions (PPIs) at the systems-level. By covalently connecting pairs of proximal …
protein interactions (PPIs) at the systems-level. By covalently connecting pairs of proximal …