Macromolecular crowding is more than hard-core repulsions

SL Speer, CJ Stewart, L Sapir… - Annual Review of …, 2022 - annualreviews.org
Cells are crowded, but proteins are almost always studied in dilute aqueous buffer. We
review the experimental evidence that crowding affects the equilibrium thermodynamics of …

Macromolecular crowding in vitro, in vivo, and in between

G Rivas, AP Minton - Trends in biochemical sciences, 2016 - cell.com
Biochemical processes take place in heterogeneous and highly volume-occupied or
crowded environments that can considerably influence the reactivity and distribution of …

Interactions of formulation excipients with proteins in solution and in the dried state

S Ohtake, Y Kita, T Arakawa - Advanced drug delivery reviews, 2011 - Elsevier
A variety of excipients are used to stabilize proteins, suppress protein aggregation, reduce
surface adsorption, or to simply provide physiological osmolality. The stabilizers encompass …

Weak chemical interactions that drive protein evolution: crowding, sticking, and quinary structure in folding and function

D Guin, M Gruebele - Chemical reviews, 2019 - ACS Publications
In recent years, better instrumentation and greater computing power have enabled the
imaging of elusive biomolecule dynamics in cells, driving many advances in understanding …

Influence of nonspecific interactions on protein associations: implications for biochemistry in vivo

G Rivas, AP Minton - Annual Review of Biochemistry, 2022 - annualreviews.org
The cellular interior is composed of a variety of microenvironments defined by distinct local
compositions and composition-dependent intermolecular interactions. We review the …

Models of macromolecular crowding effects and the need for quantitative comparisons with experiment

AH Elcock - Current opinion in structural biology, 2010 - Elsevier
In recent years significant effort has been devoted to exploring the potential effects of
macromolecular crowding on protein folding and association phenomena. Theoretical …

[HTML][HTML] Influence of crowded cellular environments on protein folding, binding, and oligomerization: biological consequences and potentials of atomistic modeling

HX Zhou - FEBS letters, 2013 - Elsevier
Recent experiments inside cells and in cytomimetic conditions have demonstrated that the
crowded environments found therein can significantly reshape the energy landscapes of …

Intrinsically disordered proteins in crowded milieu: when chaos prevails within the cellular gumbo

AV Fonin, AL Darling, IM Kuznetsova… - Cellular and molecular …, 2018 - Springer
Abstract Effects of macromolecular crowding on structural and functional properties of
ordered proteins, their folding, interactability, and aggregation are well documented. Much …

Size-dependent studies of macromolecular crowding on the thermodynamic stability, structure and functional activity of proteins: in vitro and in silico approaches

S Shahid, MI Hassan, A Islam, F Ahmad - Biochimica et Biophysica Acta …, 2017 - Elsevier
Background The environment inside cells in which proteins fold and function are quite
different from that of the dilute buffer solutions often used during in vitro experiments. The …

Crowders and cosolvents—major contributors to the cellular milieu and efficient means to counteract environmental stresses

M Gao, C Held, S Patra, L Arns, G Sadowski… - …, 2017 - Wiley Online Library
The free energy and conformational landscape of biomolecular systems as well as
biochemical reactions depend not only on temperature and pressure, but also on the …