Stochastic community assembly: does it matter in microbial ecology?

J Zhou, D Ning - Microbiology and molecular biology reviews, 2017 - Am Soc Microbiol
Understanding the mechanisms controlling community diversity, functions, succession, and
biogeography is a central, but poorly understood, topic in ecology, particularly in microbial …

[HTML][HTML] Nestedness in complex networks: observation, emergence, and implications

MS Mariani, ZM Ren, J Bascompte, CJ Tessone - Physics Reports, 2019 - Elsevier
The observed architecture of ecological and socio-economic networks differssignificantly
from that of random networks. From a network science standpoint, non-random structural …

[图书][B] Randomization, bootstrap and Monte Carlo methods in biology

BFJ Manly - 2018 - taylorfrancis.com
Modern computer-intensive statistical methods play a key role in solving many problems
across a wide range of scientific disciplines. This new edition of the bestselling …

A probabilistic model for analysing species co‐occurrence

JA Veech - Global Ecology and Biogeography, 2013 - Wiley Online Library
Aim To develop a new probabilistic model that can be used to test for statistically significant
pair‐wise patterns of species co‐occurrence. The model gives the probability that two …

Configuring random graph models with fixed degree sequences

BK Fosdick, DB Larremore, J Nishimura, J Ugander - Siam Review, 2018 - SIAM
Random graph null models have found widespread application in diverse research
communities analyzing network datasets, including social, information, and economic …

Hypothesis testing in animal social networks

DP Croft, JR Madden, DW Franks, R James - Trends in ecology & evolution, 2011 - cell.com
Behavioural ecologists are increasingly using social network analysis to describe the social
organisation of animal populations and to test hypotheses. However, the statistical analysis …

SOCPROG programs: analysing animal social structures

H Whitehead - Behavioral Ecology and Sociobiology, 2009 - Springer
SOCPROG is a set of programs which analyses data on animal associations. Data usually
come from observations of the social behaviour of individually identifiable animals …

A new conceptual and methodological framework for exploring and explaining pattern in presence–absence data

J Podani, D Schmera - Oikos, 2011 - Wiley Online Library
A conceptual framework is proposed to evaluate the relative importance of beta diversity,
nestedness and agreement in species richness in presence–absence data matrices via …

Nestedness versus modularity in ecological networks: two sides of the same coin?

MA Fortuna, DB Stouffer, JM Olesen, P Jordano… - Journal of animal …, 2010 - JSTOR
1. Understanding the structure of ecological networks is a crucial task for interpreting
community and ecosystem responses to global change. 2. Despite the recent interest in this …

[PDF][PDF] How to be a specialist? Quantifying specialisation in pollination networks

CF Dormann - Network Biology, 2011 - biometrie.uni-freiburg.de
The analysis of ecological networks has gained a very prominent foothold in ecology over
the last years. While many publications try to elucidate patterns about the networks, others …