Microbial degradation of aromatic compounds—from one strategy to four
G Fuchs, M Boll, J Heider - Nature Reviews Microbiology, 2011 - nature.com
Aromatic compounds are both common growth substrates for microorganisms and
prominent environmental pollutants. The crucial step in their degradation is overcoming the …
prominent environmental pollutants. The crucial step in their degradation is overcoming the …
[PDF][PDF] Dynamic allostery: linkers are not merely flexible
Most proteins consist of multiple domains. How do linkers efficiently transfer information
between sites that are on different domains to activate the protein? Mere flexibility only …
between sites that are on different domains to activate the protein? Mere flexibility only …
Bacterial degradation of benzoate: cross-regulation between aerobic and anaerobic pathways
JA Valderrama, G Durante-Rodríguez… - Journal of Biological …, 2012 - ASBMB
We have studied for the first time the transcriptional regulatory circuit that controls the
expression of the box genes encoding the aerobic hybrid pathway used to assimilate …
expression of the box genes encoding the aerobic hybrid pathway used to assimilate …
Whole-genome analysis of Azoarcus sp. strain CIB provides genetic insights to its different lifestyles and predicts novel metabolic features
Z Martín-Moldes, MT Zamarro, C Del Cerro… - Systematic and applied …, 2015 - Elsevier
The genomic features of Azoarcus sp. CIB reflect its most distinguishing phenotypes as a
diazotroph, facultative anaerobe, capable of degrading either aerobically and/or …
diazotroph, facultative anaerobe, capable of degrading either aerobically and/or …
Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis
N Asano, K Kato, A Nakamura, K Komoda… - Nucleic acids …, 2015 - academic.oup.com
Abstract Proteins Rpf2 and Rrs1 are required for 60S ribosomal subunit maturation. These
proteins are necessary for the recruitment of three ribosomal components (5S ribosomal …
proteins are necessary for the recruitment of three ribosomal components (5S ribosomal …
[HTML][HTML] Comparative genomic analysis of the regulation of aromatic metabolism in betaproteobacteria
IA Suvorova, MS Gelfand - Frontiers in Microbiology, 2019 - frontiersin.org
Aromatic compounds are a common carbon and energy source for many microorganisms,
some of which can even degrade toxic chloroaromatic xenobiotics. This comparative study …
some of which can even degrade toxic chloroaromatic xenobiotics. This comparative study …
Towards habitat-oriented systems biology of “Aromatoleum aromaticum” EbN1: Chemical sensing, catabolic network modulation and growth control in anaerobic …
R Rabus, K Trautwein, L Wöhlbrand - Applied microbiology and …, 2014 - Springer
The denitrifying betaproteobacterium “Aromatoleum aromaticum” EbN1 is a well-studied
model organism for anaerobic degradation of aromatic compounds. Following publication of …
model organism for anaerobic degradation of aromatic compounds. Following publication of …
Complex and flexible catabolism in Aromatoleum aromaticum pCyN1
P Becker, A Döhmann, L Wöhlbrand… - Environmental …, 2022 - Wiley Online Library
Large quantities of organic matter are continuously deposited, and (a) biotic gradients
intersect in the soil–rhizosphere, where biodegradation contributes to the global cycles of …
intersect in the soil–rhizosphere, where biodegradation contributes to the global cycles of …
Characterization of the mbd cluster encoding the anaerobic 3‐methylbenzoyl‐CoA central pathway
JF Juárez, MT Zamarro, C Eberlein… - Environmental …, 2013 - Wiley Online Library
The mbd cluster encoding genes of the 3‐methylbenzoyl‐CoA pathway involved in the
anaerobic catabolism of 3‐methylbenzoate and m‐xylene was characterized for the first time …
anaerobic catabolism of 3‐methylbenzoate and m‐xylene was characterized for the first time …
A quorum-sensing regulatory cascade for siderophore-mediated iron homeostasis in Chromobacterium violaceum
BB Batista, VM de Lima, BA Picinato, T Koide… - Msystems, 2024 - Am Soc Microbiol
Iron is a transition metal used as a cofactor in many biochemical reactions. In bacteria, iron
homeostasis involves Fur-mediated de-repression of iron uptake systems, such as the iron …
homeostasis involves Fur-mediated de-repression of iron uptake systems, such as the iron …