[HTML][HTML] Biocatalysis

EL Bell, W Finnigan, SP France, AP Green… - Nature Reviews …, 2021 - nature.com
Biocatalysis has become an important aspect of modern organic synthesis, both in
academia and across the chemical and pharmaceutical industries. Its success has been …

The crucial role of methodology development in directed evolution of selective enzymes

G Qu, A Li, CG Acevedo‐Rocha, Z Sun… - Angewandte Chemie …, 2020 - Wiley Online Library
Directed evolution of stereo‐, regio‐, and chemoselective enzymes constitutes a unique way
to generate biocatalysts for synthetically interesting transformations in organic chemistry and …

Protein–ligand binding with the coarse-grained Martini model

PCT Souza, S Thallmair, P Conflitti… - Nature …, 2020 - nature.com
The detailed understanding of the binding of small molecules to proteins is the key for the
development of novel drugs or to increase the acceptance of substrates by enzymes …

The quantum chemical cluster approach in biocatalysis

X Sheng, F Himo - Accounts of Chemical Research, 2023 - ACS Publications
Conspectus The quantum chemical cluster approach has been used for modeling enzyme
active sites and reaction mechanisms for more than two decades. In this methodology, a …

Screening and characterization of a diverse panel of metagenomic imine reductases for biocatalytic reductive amination

JR Marshall, P Yao, SL Montgomery, JD Finnigan… - Nature …, 2021 - nature.com
Finding faster and simpler ways to screen protein sequence space to enable the
identification of new biocatalysts for asymmetric synthesis remains both a challenge and a …

Biocatalysis in the pharmaceutical industry: the need for speed

MD Truppo - ACS Medicinal Chemistry Letters, 2017 - ACS Publications
The use of biocatalysis in the pharmaceutical industry continues to expand as a result of
increased access to enzymes and the ability to engineer those enzymes to meet the …

Automated design of efficient and functionally diverse enzyme repertoires

O Khersonsky, R Lipsh, Z Avizemer, Y Ashani… - Molecular cell, 2018 - cell.com
Substantial improvements in enzyme activity demand multiple mutations at spatially
proximal positions in the active site. Such mutations, however, often exhibit unpredictable …

Rational design of enzyme activity and enantioselectivity

Z Song, Q Zhang, W Wu, Z Pu, H Yu - Frontiers in Bioengineering and …, 2023 - frontiersin.org
The strategy of rational design to engineer enzymes is to predict the potential mutants based
on the understanding of the relationships between protein structure and function, and …

The challenge of predicting distal active site mutations in computational enzyme design

S Osuna - Wiley Interdisciplinary Reviews: Computational …, 2021 - Wiley Online Library
Many computational enzyme design approaches have been developed in recent years that
focus on a reduced set of key enzymatic features. Initial protocols mostly focused on the …

Computational redesign of enzymes for regio-and enantioselective hydroamination

R Li, HJ Wijma, L Song, Y Cui, M Otzen, Y Tian… - Nature chemical …, 2018 - nature.com
Introduction of innovative biocatalytic processes offers great promise for applications in
green chemistry. However, owing to limited catalytic performance, the enzymes harvested …