The importance of thiamine (vitamin B1) in plant health: From crop yield to biofortification

TB Fitzpatrick, LM Chapman - Journal of Biological Chemistry, 2020 - ASBMB
Ensuring that people have access to sufficient and nutritious food is necessary for a healthy
life and the core tenet of food security. With the global population set to reach 9.8 billion by …

Synthetic ecology of microbes: mathematical models and applications

AR Zomorrodi, D Segrè - Journal of molecular biology, 2016 - Elsevier
As the indispensable role of natural microbial communities in many aspects of life on Earth
is uncovered, the bottom-up engineering of synthetic microbial consortia with novel functions …

Integrating crop growth models with whole genome prediction through approximate Bayesian computation

F Technow, CD Messina, LR Totir, M Cooper - PloS one, 2015 - journals.plos.org
Genomic selection, enabled by whole genome prediction (WGP) methods, is revolutionizing
plant breeding. Existing WGP methods have been shown to deliver accurate predictions in …

[HTML][HTML] Biotechnological strategies for enhancing heavy metal tolerance in neglected and underutilized legume crops: A comprehensive review

KK Rai, N Pandey, RP Meena, SP Rai - Ecotoxicology and Environmental …, 2021 - Elsevier
Contamination of agricultural land and water by heavy metals due to rapid industrialization
and urbanization including various natural processes have become one of the major …

A Diel Flux Balance Model Captures Interactions between Light and Dark Metabolism during Day-Night Cycles in C3 and Crassulacean Acid Metabolism Leaves

CYM Cheung, MG Poolman, DA Fell… - Plant …, 2014 - academic.oup.com
Although leaves have to accommodate markedly different metabolic flux patterns in the light
and the dark, models of leaf metabolism based on flux-balance analysis (FBA) have so far …

Recent advances in reconstruction and applications of genome-scale metabolic models

TY Kim, SB Sohn, YB Kim, WJ Kim, SY Lee - Current opinion in …, 2012 - Elsevier
In the last decade, reconstruction and applications of genome-scale metabolic models have
greatly influenced the field of systems biology by providing a platform on which high …

Genetic basis and detection of unintended effects in genetically modified crop plants

GS Ladics, A Bartholomaeus, P Bregitzer… - Transgenic …, 2015 - Springer
In January 2014, an international meeting sponsored by the International Life Sciences
Institute/Health and Environmental Sciences Institute and the Canadian Food Inspection …

Genome-scale model reveals metabolic basis of biomass partitioning in a model diatom

J Levering, J Broddrick, CL Dupont, G Peers, K Beeri… - PloS one, 2016 - journals.plos.org
Diatoms are eukaryotic microalgae that contain genes from various sources, including
bacteria and the secondary endosymbiotic host. Due to this unique combination of genes …

Genome-Scale Metabolic Model for the Green Alga Chlorella vulgaris UTEX 395 Accurately Predicts Phenotypes under Autotrophic, Heterotrophic, and Mixotrophic …

C Zuñiga, CT Li, T Huelsman, J Levering… - Plant …, 2016 - academic.oup.com
The green microalga Chlorella vulgaris has been widely recognized as a promising
candidate for biofuel production due to its ability to store high lipid content and its natural …

k-OptForce: integrating kinetics with flux balance analysis for strain design

A Chowdhury, AR Zomorrodi… - PLoS computational …, 2014 - journals.plos.org
Computational strain design protocols aim at the system-wide identification of intervention
strategies for the enhanced production of biochemicals in microorganisms. Existing …