Comparing open-source toolboxes for processing and analysis of spike and local field potentials data

VA Unakafova, A Gail - Frontiers in Neuroinformatics, 2019 - frontiersin.org
Analysis of spike and local field potential (LFP) data is an essential part of neuroscientific
research. Today there exist many open-source toolboxes for spike and LFP data analysis …

Real-time cortical simulation on neuromorphic hardware

O Rhodes, L Peres, AGD Rowley… - … of the Royal …, 2020 - royalsocietypublishing.org
Real-time simulation of a large-scale biologically representative spiking neural network is
presented, through the use of a heterogeneous parallelization scheme and SpiNNaker …

Optogenetic pacing of medial septum parvalbumin-positive cells disrupts temporal but not spatial firing in grid cells

ME Lepperød, AC Christensen, KK Lensjø… - Science …, 2021 - science.org
Grid cells in the medial entorhinal cortex (MEC) exhibit remarkable spatial activity patterns
with spikes coordinated by theta oscillations driven by the medial septal area (MSA). Spikes …

Parallelization of neural processing on neuromorphic hardware

L Peres, O Rhodes - Frontiers in Neuroscience, 2022 - frontiersin.org
Learning and development in real brains typically happens over long timescales, making
long-term exploration of these features a significant research challenge. One way to address …

SANTIA: a Matlab-based open-source toolbox for artifact detection and removal from extracellular neuronal signals

M Fabietti, M Mahmud, A Lotfi, MS Kaiser, A Averna… - Brain Informatics, 2021 - Springer
Neuronal signals generally represent activation of the neuronal networks and give insights
into brain functionalities. They are considered as fingerprints of actions and their processing …

[HTML][HTML] BCI-AMSH: A MATLAB based open-source brain computer interface assistive application for mental stress healing

CR Rashmi, CP Shantala - e-Prime-Advances in Electrical Engineering …, 2023 - Elsevier
Numerous Brain computer interface (BCI) assistive software applications or toolboxes help
to monitor the status of brain through Electroencephalogram (EEG); however, currently there …

A collaborative simulation-analysis workflow for computational neuroscience using HPC

J Senk, A Yegenoglu, O Amblet, Y Brukau… - … Computing: First JARA …, 2017 - Springer
Workflows for the acquisition and analysis of data in the natural sciences exhibit a growing
degree of complexity and heterogeneity, are increasingly performed in large collaborative …

GhostiPy: an efficient signal processing and spectral analysis toolbox for large data

JP Chu, CT Kemere - eneuro, 2021 - eneuro.org
Recent technological advances have enabled neural recordings consisting of hundreds to
thousands of channels. As the pace of these developments continues to grow rapidly, it is …

A matlab-based open-source toolbox for artefact removal from extracellular neuronal signals

M Fabietti, M Mahmud, A Lotfi - International conference on brain …, 2021 - Springer
The neural recordings in the form of local field potentials offer useful insights on higher-level
neural functions by providing information about the activation and deactivation of neural …

Staged deployment of interactive multi-application HPC workflows

W Klijn, S Diaz-Pier, A Morrison… - … Conference on High …, 2019 - ieeexplore.ieee.org
Running scientific workflows on a supercomputer can be a daunting task for a scientific
domain specialist. Workflow management solutions (WMS) are a standard method for …