Microbial indicators as a diagnostic tool for assessing water quality and climate stress in coral reef ecosystems
Microorganisms play a fundamental role in the functioning and stability of coral reef
ecosystems. However, environmental disturbances can trigger alterations to the natural …
ecosystems. However, environmental disturbances can trigger alterations to the natural …
[HTML][HTML] Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences
Abstract Background Sequencing of 16S rRNA genes has become a powerful technique to
study microbial communities and their responses towards changing environmental …
study microbial communities and their responses towards changing environmental …
[HTML][HTML] Recurring patterns in bacterioplankton dynamics during coastal spring algae blooms
H Teeling, BM Fuchs, CM Bennke, K Krüger, M Chafee… - elife, 2016 - elifesciences.org
A process of global importance in carbon cycling is the remineralization of algae biomass by
heterotrophic bacteria, most notably during massive marine algae blooms. Such blooms can …
heterotrophic bacteria, most notably during massive marine algae blooms. Such blooms can …
Phylogenomics of Rhodobacteraceae reveals evolutionary adaptation to marine and non-marine habitats
M Simon, C Scheuner, JP Meier-Kolthoff… - The ISME …, 2017 - academic.oup.com
Abstract Marine Rhodobacteraceae (Alphaproteobacteria) are key players of
biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic …
biogeochemical cycling, comprise up to 30% of bacterial communities in pelagic …
Environmental DNA and RNA in aquatic community ecology: Toward methodological standardization
Molecular technologies have facilitated the expansion of biodiversity assessments across a
broad range of organisms and aquatic systems. Environmental DNA (eDNA) and …
broad range of organisms and aquatic systems. Environmental DNA (eDNA) and …
[HTML][HTML] North Sea spring bloom-associated Gammaproteobacteria fill diverse heterotrophic niches
B Francis, T Urich, A Mikolasch, H Teeling… - Environmental …, 2021 - Springer
Background The planktonic bacterial community associated with spring phytoplankton
blooms in the North Sea is responsible for a large amount of carbon turnover in an …
blooms in the North Sea is responsible for a large amount of carbon turnover in an …
The polar night shift: seasonal dynamics and drivers of Arctic Ocean microbiomes revealed by autonomous sampling
Abstract The Arctic Ocean features extreme seasonal differences in daylight, temperature,
ice cover, and mixed layer depth. However, the diversity and ecology of microbes across …
ice cover, and mixed layer depth. However, the diversity and ecology of microbes across …
Deciphering associations between dissolved organic molecules and bacterial communities in a pelagic marine system
H Osterholz, G Singer, B Wemheuer, R Daniel… - The ISME …, 2016 - academic.oup.com
Dissolved organic matter (DOM) is the main substrate and energy source for heterotrophic
bacterioplankton. To understand the interactions between DOM and the bacterial community …
bacterioplankton. To understand the interactions between DOM and the bacterial community …
[HTML][HTML] The Majority of Active Rhodobacteraceae in Marine Sediments Belong to Uncultured Genera: A Molecular Approach to Link Their Distribution to …
M Pohlner, L Dlugosch, B Wemheuer, H Mills… - Frontiers in …, 2019 - frontiersin.org
General studies on benthic microbial communities focus on fundamental biogeochemical
processes or the most abundant constituents. Thereby, minor fractions such as the …
processes or the most abundant constituents. Thereby, minor fractions such as the …
[HTML][HTML] Significance of gene variants for the functional biogeography of the near-surface Atlantic Ocean microbiome
L Dlugosch, A Poehlein, B Wemheuer, B Pfeiffer… - Nature …, 2022 - nature.com
Microbial communities are major drivers of global elemental cycles in the oceans due to
their high abundance and enormous taxonomic and functional diversity. Recent studies …
their high abundance and enormous taxonomic and functional diversity. Recent studies …