Klumpy: A tool to evaluate the integrity of long‐read genome assemblies and illusive sequence motifs

G Madrigal, BF Minhas… - Molecular ecology …, 2025 - Wiley Online Library
The improvement and decreasing costs of third‐generation sequencing technologies has
widened the scope of biological questions researchers can address with de novo genome …

Novel mitochondrial genome rearrangements including duplications and extensive heteroplasmy could underlie temperature adaptations in Antarctic notothenioid …

BF Minhas, EA Beck, CHC Cheng, J Catchen - Scientific reports, 2023 - nature.com
Mitochondrial genomes are known for their compact size and conserved gene order,
however, recent studies employing long-read sequencing technologies have revealed the …

Chromosome-level genome assembly and annotation of the Antarctica whitefin plunderfish Pogonophryne albipinna

E Jo, S Choi, SJ Lee, J Kim, EK Choi, M Cho, J Kim… - Scientific data, 2023 - nature.com
Abstract The Antarctic whitefin plunderfish Pogonophryne albipinna belongs to the family
Artedidraconidae, a key component of Antarctic benthic ecosystems within the order …

The genome of the cryopelagic Antarctic bald notothen, Trematomus borchgrevinki

N Rayamajhi, AG Rivera-Colón… - G3: Genes …, 2025 - academic.oup.com
Abstract The Antarctic bald notothen, Trematomus borchgrevinki (family Nototheniidae)
occupies a high latitude, ice-laden environment and represents an extreme example of cold …

Chromosome-Level Genome Assembly and Circadian Gene Repertoire of the Patagonia Blennie Eleginops maclovinus—The Closest Ancestral Proxy of Antarctic …

CHC Cheng, AG Rivera-Colón, BF Minhas, L Wilson… - Genes, 2023 - mdpi.com
The basal South American notothenioid Eleginops maclovinus (Patagonia blennie or
róbalo) occupies a uniquely important phylogenetic position in Notothenioidei as the …

Gene loss in Antarctic icefish: evolutionary adaptations mimicking Fanconi Anemia?

SC Shin, S Kim, HW Kim, JH Lee, JH Kim - BMC genomics, 2024 - Springer
Abstract Background The white-blooded Antarctic icefishes is a representative organism that
survive under the stenothermal conditions of the Southern Ocean without the hemoglobin …

Transcriptomic analysis of the Brazilian blind characid, Stygichthys typhlops, reveals convergent selection with Astyanax mexicanus and other cavefishes

D Arcila, M Rincon-Sandoval, W Hanson… - Frontiers in Ecology …, 2023 - frontiersin.org
Molecular studies have shown that Neotropical fishes of the order Characiformes have
undergone two independent events of cave colonization. Among these fishes are the …

Museomics analyses inform about Channichthys icefish species diversity

B Garmann-Aarhus, E Nikolaeva, T Desvignes… - bioRxiv, 2024 - biorxiv.org
The rapid diversification of notothenioid fishes in the waters surrounding the Antarctic
continent is a prime example of the process of adaptive radiation. Within around 10 million …

Comparative Genomics of Fish: Insights into Evolutionary Processes

M Li - International Journal of Molecular Zoology, 2024 - animalscipublisher.com
Comparative genomics provides a powerful tool for understanding evolutionary processes,
particularly in the diverse and ecologically significant group of fish. This study explores the …

[PDF][PDF] The law of the critical illness and its far-reaching implications

P Ola - researchgate.net
Background: The exact mechanistic process to be therapeutically modified to solve the
problem constituted by high mortality in very critically ill patients remains unexplored …