Multi-omic and multi-view clustering algorithms: review and cancer benchmark
N Rappoport, R Shamir - Nucleic acids research, 2018 - academic.oup.com
Recent high throughput experimental methods have been used to collect large biomedical
omics datasets. Clustering of single omic datasets has proven invaluable for biological and …
omics datasets. Clustering of single omic datasets has proven invaluable for biological and …
A review on machine learning principles for multi-view biological data integration
Driven by high-throughput sequencing techniques, modern genomic and clinical studies are
in a strong need of integrative machine learning models for better use of vast volumes of …
in a strong need of integrative machine learning models for better use of vast volumes of …
Correlation and association analyses in microbiome study integrating multiomics in health and disease
Y Xia - Progress in molecular biology and translational …, 2020 - Elsevier
Correlation and association analyses are one of the most widely used statistical methods in
research fields, including microbiome and integrative multiomics studies. Correlation and …
research fields, including microbiome and integrative multiomics studies. Correlation and …
Data analysis strategies for targeted and untargeted LC-MS metabolomic studies: Overview and workflow
Data analysis is a very challenging task in LC-MS metabolomic studies. The use of powerful
analytical techniques (eg, high-resolution mass spectrometry) provides high-dimensional …
analytical techniques (eg, high-resolution mass spectrometry) provides high-dimensional …
Multi-omics analyses of 398 foxtail millet accessions reveal genomic regions associated with domestication, metabolite traits, and anti-inflammatory effects
Foxtail millet (Setaria italica), which was domesticated from the wild species green foxtail
(Setaria viridis), is a rich source of phytonutrients for humans. To evaluate how breeding …
(Setaria viridis), is a rich source of phytonutrients for humans. To evaluate how breeding …
Integrated omics analysis of specialized metabolism in medicinal plants
Medicinal plants are a rich source of highly diverse specialized metabolites with important
pharmacological properties. Until recently, plant biologists were limited in their ability to …
pharmacological properties. Until recently, plant biologists were limited in their ability to …
Integrative omics approaches for biosynthetic pathway discovery in plants
Covering: up to 2022 With the emergence of large amounts of omics data, computational
approaches for the identification of plant natural product biosynthetic pathways and their …
approaches for the identification of plant natural product biosynthetic pathways and their …
Evaluation and comparison of multi-omics data integration methods for cancer subtyping
Computational integrative analysis has become a significant approach in the data-driven
exploration of biological problems. Many integration methods for cancer subtyping have …
exploration of biological problems. Many integration methods for cancer subtyping have …
Influence of malt source on beer chemistry, flavor, and flavor stability
HM Bettenhausen, L Barr, CD Broeckling… - Food research …, 2018 - Elsevier
Beverage quality in the brewing industry is heavily influenced by ingredient properties. The
contribution of raw ingredients such as yeast and hops to beer flavor is well understood …
contribution of raw ingredients such as yeast and hops to beer flavor is well understood …
The current developments in medicinal plant genomics enabled the diversification of secondary metabolites' biosynthesis
MM Alami, Z Ouyang, Y Zhang, S Shu, G Yang… - International journal of …, 2022 - mdpi.com
Medicinal plants produce important substrates for their adaptation and defenses against
environmental factors and, at the same time, are used for traditional medicine and industrial …
environmental factors and, at the same time, are used for traditional medicine and industrial …