Morphogen rules: design principles of gradient-mediated embryo patterning

J Briscoe, S Small - Development, 2015 - journals.biologists.com
The Drosophila blastoderm and the vertebrate neural tube are archetypal examples of
morphogen-patterned tissues that create precise spatial patterns of different cell types. In …

Morphogen gradients: from generation to interpretation

KW Rogers, AF Schier - Annual review of cell and …, 2011 - annualreviews.org
Morphogens are long-range signaling molecules that pattern developing tissues in a
concentration-dependent manner. The graded activity of morphogens within tissues …

Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation

KJ Brennan, M Weilert, S Krueger, A Pampari, H Liu… - Developmental cell, 2023 - cell.com
Chromatin accessibility is integral to the process by which transcription factors (TFs) read out
cis-regulatory DNA sequences, but it is difficult to differentiate between TFs that drive …

The gap gene network

J Jaeger - Cellular and Molecular Life Sciences, 2011 - Springer
Gap genes are involved in segment determination during the early development of the fruit
fly Drosophila melanogaster as well as in other insects. This review attempts to synthesize …

The Capicua repressor–a general sensor of RTK signaling in development and disease

G Jiménez, SY Shvartsman… - Journal of cell …, 2012 - journals.biologists.com
Receptor tyrosine kinase (RTK) signaling pathways control multiple cellular decisions in
metazoans, often by regulating the expression of downstream genes. In Drosophila …

mRNA localization and translational control in Drosophila oogenesis

P Lasko - Cold Spring Harbor perspectives in biology, 2012 - cshperspectives.cshlp.org
Localization of an mRNA species to a particular subcellular region can complement
translational control mechanisms to produce a restricted spatial distribution of the protein it …

[HTML][HTML] A system of repressor gradients spatially organizes the boundaries of Bicoid-dependent target genes

H Chen, Z Xu, C Mei, D Yu, S Small - Cell, 2012 - cell.com
The homeodomain (HD) protein Bicoid (Bcd) is thought to function as a gradient morphogen
that positions boundaries of target genes via threshold-dependent activation mechanisms …

Transcriptional Enhancers in Drosophila

S Small, DN Arnosti - Genetics, 2020 - academic.oup.com
Key discoveries in Drosophila have shaped our understanding of cellular “enhancers.” With
a special focus on the fly, this chapter surveys properties of these adaptable cis-regulatory …

Concentration dependent chromatin states induced by the bicoid morphogen gradient

CE Hannon, SA Blythe, EF Wieschaus - Elife, 2017 - elifesciences.org
In Drosophila, graded expression of the maternal transcription factor Bicoid (Bcd) provides
positional information to activate target genes at different positions along the anterior …

Dynamic interpretation of maternal inputs by the Drosophila segmentation gene network

F Liu, AH Morrison, T Gregor - Proceedings of the National …, 2013 - National Acad Sciences
Patterning of body parts in multicellular organisms relies on the interpretation of transcription
factor (TF) concentrations by genetic networks. To determine the extent by which absolute …