[HTML][HTML] Small RNAs as guardians of the genome

CD Malone, GJ Hannon - Cell, 2009 - cell.com
Transposons populate the landscape of all eukaryotic genomes. Often considered purely
genomic parasites, transposons can also benefit their hosts, playing roles in gene regulation …

Programmed chromosome fragmentation in ciliated protozoa: multiple means to chromosome ends

M Bétermier, LA Klobutcher, E Orias - Microbiology and Molecular …, 2023 - Am Soc Microbiol
Ciliated protozoa undergo large-scale developmental rearrangement of their somatic
genomes when forming a new transcriptionally active macronucleus during conjugation …

A small RNA-guided PRC2 complex eliminates DNA as an extreme form of transposon silencing

C Wang, T Solberg, XX Maurer-Alcala, EC Swart… - Cell reports, 2022 - cell.com
In animal germlines, transposons are silenced at the transcriptional or post-transcriptional
level to prevent deleterious expression. Ciliates employ a more direct approach by …

PiggyMac, a domesticated piggyBac transposase involved in programmed genome rearrangements in the ciliate Paramecium tetraurelia

C Baudry, S Malinsky, M Restituito… - Genes & …, 2009 - genesdev.cshlp.org
Programmed genome rearrangements drive functional gene assembly in ciliates during the
development of the somatic macronucleus. The elimination of germline sequences is …

Delete and survive: strategies of programmed genetic material elimination in eukaryotes

D Dedukh, A Krasikova - Biological Reviews, 2022 - Wiley Online Library
Genome stability is a crucial feature of eukaryotic organisms because its alteration
drastically affects the normal development and survival of cells and the organism as a …

[HTML][HTML] Piwi-interacting RNAs protect DNA against loss during Oxytricha genome rearrangement

W Fang, X Wang, JR Bracht, M Nowacki… - Cell, 2012 - cell.com
Genome duality in ciliated protozoa offers a unique system to showcase their epigenome as
a model of inheritance. In Oxytricha, the somatic genome is responsible for vegetative …

The Paramecium Germline Genome Provides a Niche for Intragenic Parasitic DNA: Evolutionary Dynamics of Internal Eliminated Sequences

O Arnaiz, N Mathy, C Baudry, S Malinsky, JM Aury… - 2012 - journals.plos.org
Insertions of parasitic DNA within coding sequences are usually deleterious and are
generally counter-selected during evolution. Thanks to nuclear dimorphism, ciliates provide …

Programmed genome rearrangements in ciliates

I Rzeszutek, XX Maurer-Alcalá, M Nowacki - Cellular and Molecular Life …, 2020 - Springer
Ciliates are a highly divergent group of unicellular eukaryotes with separate somatic and
germline genomes found in distinct dimorphic nuclei. This characteristic feature is tightly …

Epigenetics of ciliates

DL Chalker, E Meyer… - Cold Spring Harbor …, 2013 - cshperspectives.cshlp.org
Research using ciliates revealed early examples of epigenetic phenomena and continues to
provide novel findings. These protozoans maintain separate germline and somatic nuclei …

DNA elimination in ciliates: transposon domestication and genome surveillance

DL Chalker, MC Yao - Annual review of genetics, 2011 - annualreviews.org
Ciliated protozoa extensively remodel their somatic genomes during nuclear development,
fragmenting their chromosomes and removing large numbers of internal eliminated …