Epigenetic plasticity and the hallmarks of cancer

WA Flavahan, E Gaskell, BE Bernstein - Science, 2017 - science.org
BACKGROUND Chromatin is the essential medium through which transcription factors,
signaling pathways, and other cues alter gene activity and cellular phenotypes. It assumes …

[HTML][HTML] Nutrigenomics of vitamin D

C Carlberg - Nutrients, 2019 - mdpi.com
Nutrigenomics studies how environmental factors, such as food intake and lifestyle,
influence the expression of the genome. Vitamin D3 represents a master example of …

Nuclear mechanosensing drives chromatin remodelling in persistently activated fibroblasts

CJ Walker, C Crocini, D Ramirez, AR Killaars… - Nature biomedical …, 2021 - nature.com
Fibrotic disease is caused by the continuous deposition of extracellular matrix by persistently
activated fibroblasts (also known as myofibroblasts), even after the resolution of the injury …

[HTML][HTML] Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration

LY Wu, GD Shang, FX Wang, J Gao, MC Wan, ZG Xu… - Developmental Cell, 2022 - cell.com
Shoot regeneration is mediated by the sequential action of two phytohormones, auxin and
cytokinin. However, the chromatin regulatory landscapes underlying this dynamic response …

[HTML][HTML] Vitamin D: A master example of nutrigenomics

C Carlberg, M Raczyk, N Zawrotna - Redox Biology, 2023 - Elsevier
Nutrigenomics attempts to characterize and integrate the relation between dietary molecules
and gene expression on a genome-wide level. One of the biologically active nutritional …

A modular dCas9-SunTag DNMT3A epigenome editing system overcomes pervasive off-target activity of direct fusion dCas9-DNMT3A constructs

C Pflueger, D Tan, T Swain, T Nguyen… - Genome …, 2018 - genome.cshlp.org
Detection of DNA methylation in the genome has been possible for decades; however, the
ability to deliberately and specifically manipulate local DNA methylation states in the …

DNA methylation and the preservation of cell identity

O Bogdanović, R Lister - Current opinion in genetics & development, 2017 - Elsevier
DNA methylation is a major epigenetic modification of vertebrate genomes that is mostly
associated with transcriptional repression. During embryogenesis, DNA methylation …

Reactivation of embryonic genetic programs in tissue regeneration and disease

H Fazilaty, K Basler - Nature Genetics, 2023 - nature.com
Embryonic genetic programs are reactivated in response to various types of tissue damage,
providing cell plasticity for tissue regeneration or disease progression. In acute conditions …

Human histone H1 variants impact splicing outcome by controlling RNA polymerase II elongation

C Pascal, J Zonszain, O Hameiri, C Gargi-Levi… - Molecular Cell, 2023 - cell.com
Histones shape chromatin structure and the epigenetic landscape. H1, the most diverse
histone in the human genome, has 11 variants. Due to the high structural similarity between …

[HTML][HTML] Retention of paternal DNA methylome in the developing zebrafish germline

K Skvortsova, K Tarbashevich, M Stehling… - Nature …, 2019 - nature.com
Two waves of DNA methylation reprogramming occur during mammalian embryogenesis;
during preimplantation development and during primordial germ cell (PGC) formation …