Impact of nanopore-based metagenome sequencing on tick-borne virus detection

K Ergunay, E Dincer, SA Justi, BP Bourke… - Frontiers in …, 2023 - frontiersin.org
Introduction We evaluated metagenomic nanopore sequencing (NS) in field-collected ticks
and compared findings from amplification-based assays. Methods Forty tick pools collected …

Diversity of Viruses in Ixodes ricinus in Europe including Novel and Potential Arboviruses

BE Bratuleanu, C Răileanu, A Bennouna… - Transboundary and …, 2023 - Wiley Online Library
Tick‐borne pathogens are responsible for many vector‐borne diseases in Europe, causing
important problems for human and animal health. The composition of viral communities in …

Microseek: a protein-based metagenomic pipeline for virus diagnostic and discovery

P Pérot, T Bigot, S Temmam, B Regnault, M Eloit - Viruses, 2022 - mdpi.com
We present Microseek, a pipeline for virus identification and discovery based on RVDB-prot,
a comprehensive, curated and regularly updated database of viral proteins. Microseek …

Mining public data to investigate the virome of neglected pollinators and other floral visitors

SF de Santana, VC Santos, ÍS Lopes, JAM Porto… - Viruses, 2023 - mdpi.com
This study reports the virome investigation of pollinator species and other floral visitors
associated with plants from the south of Bahia: Aphis aurantii, Atrichopogon sp., Dasyhelea …

Longitudinal Study of Viral Diversity Associated with Mosquito Species Circulating in Cambodia

S Mohamed Ali, A Rakotonirina, K Heng, E Jacquemet… - Viruses, 2023 - mdpi.com
Arthropod-borne viruses (arboviruses) pose a significant global health threat and are
primarily transmitted by mosquitoes. In Cambodia, there are currently 290 recorded …

Endogenous Viral Elements in Ixodid Tick Genomes

M Barnes, DC Price - Viruses, 2023 - mdpi.com
The documentation of endogenous viral elements (EVEs; virus-derived genetic material
integrated into the genome of a nonviral host) has offered insights into how arthropods …

Characterisation of putative novel tick viruses and zoonotic risk prediction

Y Lin, DJ Pascall - Ecology and Evolution, 2024 - Wiley Online Library
Tick‐associated viruses remain a substantial zoonotic risk worldwide, so knowledge of the
diversity of tick viruses has potential health consequences. Despite their importance, large …

Characterisation and zoonotic risk of tick viruses in public datasets

Y Lin, DJ Pascall - bioRxiv, 2022 - biorxiv.org
Tick-borne viruses remain a substantial zoonotic risk worldwide, so knowledge of the
diversity of tick viruses has potential health consequences. Despite their importance, large …

A search for tick-associated, bronnoya-like virus spillover into sheep

BE Bratuleanu, C Raileanu, D Chrétien… - Microorganisms, 2023 - mdpi.com
Tick-borne diseases are responsible for many vector-borne diseases within Europe.
Recently, novel viruses belonging to a new viral family of the order Bunyavirales were …

Analysis of virome in ticks collected from rescued wild animals and captured migratory birds in the Republic of Korea

류미선 - 2024 - s-space.snu.ac.kr
Ticks are blood-sucking parasitic arthropods that cause various diseases in humans and
animals by spreading pathogens. Considering the role of ticks as vectors of disease …