Molecular mechanisms of transgenerational epigenetic inheritance

MH Fitz-James, G Cavalli - Nature Reviews Genetics, 2022 - nature.com
Increasing evidence indicates that non-DNA sequence-based epigenetic information can be
inherited across several generations in organisms ranging from yeast to plants to humans …

The FLC Locus: A Platform for Discoveries in Epigenetics and Adaptation

C Whittaker, C Dean - Annual review of cell and developmental …, 2017 - annualreviews.org
Our understanding of the detailed molecular mechanisms underpinning adaptation is still
poor. One example for which mechanistic understanding of regulation has converged with …

De novo gene birth

SB Van Oss, AR Carvunis - PLoS genetics, 2019 - journals.plos.org
De novo gene birth is the process by which new genes evolve from DNA sequences that
were ancestrally non-genic. De novo genes represent a subset of novel genes, and may be …

Widespread natural variation of DNA methylation within angiosperms

CE Niederhuth, AJ Bewick, L Ji, MS Alabady, KD Kim… - Genome biology, 2016 - Springer
Background DNA methylation is an important feature of plant epigenomes, involved in the
formation of heterochromatin and affecting gene expression. Extensive variation of DNA …

Epigenetics for crop improvement in times of global change

I Kakoulidou, EV Avramidou, M Baránek… - Biology, 2021 - mdpi.com
Simple Summary Research on plant epigenetics aims to understand how endogenous,
biotic, and abiotic factors regulate plant development and growth independent of changes in …

The Arabidopsis thaliana mobilome and its impact at the species level

L Quadrana, A Bortolini Silveira, GF Mayhew… - elife, 2016 - elifesciences.org
Transposable elements (TEs) are powerful motors of genome evolution yet a
comprehensive assessment of recent transposition activity at the species level is lacking for …

Precise plant breeding using new genome editing techniques: opportunities, safety and regulation in the EU

F Hartung, J Schiemann - The Plant Journal, 2014 - Wiley Online Library
Several new plant breeding techniques (NPBT s) have been developed during the last
decade, and make it possible to precisely perform genome modifications in plants. The …

Heat stress-induced transposon activation correlates with 3D chromatin organization rearrangement in Arabidopsis

L Sun, Y Jing, X Liu, Q Li, Z Xue, Z Cheng… - Nature …, 2020 - nature.com
In higher eukaryotes, heterochromatin is mainly composed of transposable elements (TEs)
silenced by epigenetic mechanisms. But, the silencing of certain heterochromatin …

Putting DNA methylation in context: from genomes to gene expression in plants

CE Niederhuth, RJ Schmitz - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Plant DNA methylation is its own language, interpreted by the cell to maintain silencing of
transposons, facilitate chromatin structure, and to ensure proper expression of some genes …

Epigenome-wide inheritance of cytosine methylation variants in a recombinant inbred population

RJ Schmitz, Y He, O Valdés-López, SM Khan… - Genome …, 2013 - genome.cshlp.org
Cytosine DNA methylation is one avenue for passing information through cell divisions.
Here, we present epigenomic analyses of soybean recombinant inbred lines (RILs) and their …