COVID-19 in 16 West African countries: An assessment of the epidemiology and genetic diversity of SARS-CoV-2 after four epidemic waves

AJS Ndiaye, M Beye, A Sow, G Lo… - … American journal of …, 2023 - pmc.ncbi.nlm.nih.gov
West Africa faced the COVID-19 pandemic in early March 2020 and, as of March 31, 2022,
had more than 900,000 confirmed cases and more than 12,000 deaths. During this period …

Genetic diversity of SARS-CoV-2 infections in Ghana from 2020-2021

CM Morang'a, JM Ngoi, J Gyamfi, DSY Amuzu… - Nature …, 2022 - nature.com
The COVID-19 pandemic is one of the fastest evolving pandemics in recent history. As such,
the SARS-CoV-2 viral evolution needs to be continuously tracked. This study sequenced …

Tracking the introduction and spread of SARS-CoV-2 in coastal Kenya

G Githinji, ZR de Laurent, KS Mohammed… - Nature …, 2021 - nature.com
Genomic surveillance of SARS-CoV-2 is important for understanding both the evolution and
the patterns of local and global transmission. Here, we generated 311 SARS-CoV-2 …

The relevance of genomic epidemiology for control of tuberculosis in West Africa

P Asare, A Asante-Poku, S Osei-Wusu… - Frontiers in Public …, 2021 - frontiersin.org
Tuberculosis (TB), an airborne infectious disease caused by Mycobacterium tuberculosis
complex (MTBC), remains a global health problem. West Africa has a unique epidemiology …

[HTML][HTML] Predictors of COVID-19 epidemics in countries of the World Health Organization African Region

F Zhang, H Karamagi, N Nsenga, M Nanyunja… - Nature medicine, 2021 - nature.com
Abstract Countries of the World Health Organization (WHO) African Region have
experienced a wide range of coronavirus disease 2019 (COVID-19) epidemics. This study …

Prevalence of SARS-CoV-2 and co-infection with malaria during the first wave of the pandemic (the Burkina Faso case)

D López-Farfán, RS Yerbanga… - Frontiers in public …, 2022 - frontiersin.org
Africa accounts for 1.5% of the global coronavirus disease 2019 (COVID-19) cases and
2.7% of deaths, but this low incidence has been partly attributed to the limited testing …

[HTML][HTML] Trends of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) antibody prevalence in selected regions across Ghana

PK Quashie, JK Mutungi… - Wellcome Open …, 2021 - wellcomeopenresearch.org
Background: We set out to estimate the community-level exposure to severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) in Ghana. Methods: Phased …

Emergence of the novel SARS-CoV-2 lineage VUI-NP13L and massive spread of P. 2 in South Brazil

FH Sant'Anna, AP Muterle Varela… - Emerging Microbes & …, 2021 - Taylor & Francis
In this study, we analyzed 340 whole genomes of SARS-CoV-2, which were sampled
between April and November 2020 in 33 cities of Rio Grande do Sul, South Brazil. We …

Enhanced deep convolutional neural network for sars-cov-2 variants classification

MJ Mwanga, HO Obura, M Evans, OI Awe - BioRxiv, 2023 - biorxiv.org
High-throughput sequencing techniques and sequence analysis have enabled the
taxonomic classification of pathogens present in clinical samples. Sequencing provides an …

Molecular characterization of interactions between the D614G variant of SARS-CoV-2 S-protein and neutralizing antibodies: a computational approach

A Kwarteng, E Asiedu, AA Sylverken, A Larbi… - Infection, Genetics and …, 2021 - Elsevier
The D614G variant of SARS-CoV-2 S-protein emerged in early 2020 and quickly became
the dominant circulating strain in Europe and its environs. The variant was characterized by …