Emerging roles of linker histones in regulating chromatin structure and function

DV Fyodorov, BR Zhou, AI Skoultchi… - Nature reviews Molecular …, 2018 - nature.com
Together with core histones, which make up the nucleosome, the linker histone (H1) is one
of the five main histone protein families present in chromatin in eukaryotic cells. H1 binds to …

Nucleosome structure and function

RK McGinty, S Tan - Chemical reviews, 2015 - ACS Publications
When fully extended, one copy of the three billion base pair human genome reaches a
length of over two meters. Yet, it must be packaged into the nucleus of a cell with an average …

ChromEMT: Visualizing 3D chromatin structure and compaction in interphase and mitotic cells

HD Ou, S Phan, TJ Deerinck, A Thor, MH Ellisman… - Science, 2017 - science.org
INTRODUCTION In human cells, 2 m of DNA are compacted in the nucleus through
assembly with histones and other proteins into chromatin structures, megabase three …

Structure of native chromatin fibres revealed by Cryo-ET in situ

Z Hou, F Nightingale, Y Zhu… - Nature …, 2023 - nature.com
The structure of chromatin plays pivotal roles in regulating gene transcription, DNA
replication and repair, and chromosome segregation. This structure, however, remains …

[HTML][HTML] Chromatin fibers are formed by heterogeneous groups of nucleosomes in vivo

MA Ricci, C Manzo, MF García-Parajo, M Lakadamyali… - Cell, 2015 - cell.com
Nucleosomes help structure chromosomes by compacting DNA into fibers. To gain insight
into how nucleosomes are arranged in vivo, we combined quantitative super-resolution …

[HTML][HTML] Primary role of the nucleosome

RD Kornberg, Y Lorch - Molecular cell, 2020 - cell.com
Whereas the core nucleosome is thought to serve as a packaging device for the coiling and
contraction in length of genomic DNA, we suggest that it serves primarily in the regulation of …

Generalized Born implicit solvent models for biomolecules

AV Onufriev, DA Case - Annual review of biophysics, 2019 - annualreviews.org
It would often be useful in computer simulations to use an implicit description of solvation
effects, instead of explicitly representing the individual solvent molecules. Continuum …

New insights into nucleosome and chromatin structure: an ordered state or a disordered affair?

K Luger, ML Dechassa, DJ Tremethick - Nature reviews Molecular cell …, 2012 - nature.com
The compaction of genomic DNA into chromatin has profound implications for the regulation
of key processes such as transcription, replication and DNA repair. Nucleosomes, the …

Cryo-EM study of the chromatin fiber reveals a double helix twisted by tetranucleosomal units

F Song, P Chen, D Sun, M Wang, L Dong, D Liang… - Science, 2014 - science.org
The hierarchical packaging of eukaryotic chromatin plays a central role in transcriptional
regulation and other DNA-related biological processes. Here, we report the 11-angstrom …

Chromatin higher-order structures and gene regulation

G Li, D Reinberg - Current opinion in genetics & development, 2011 - Elsevier
Genomic DNA in the eukaryotic nucleus is hierarchically packaged by histones into
chromatin to fit inside the nucleus. The dynamics of higher-order chromatin compaction play …