Biased gene conversion and the evolution of mammalian genomic landscapes
Recombination is typically thought of as a symmetrical process resulting in large-scale
reciprocal genetic exchanges between homologous chromosomes. Recombination events …
reciprocal genetic exchanges between homologous chromosomes. Recombination events …
In plants, highly expressed genes are the least compact
XY Ren, O Vorst, MWEJ Fiers, WJ Stiekema, JP Nap - Trends in genetics, 2006 - cell.com
In both the monocot rice and the dicot Arabidopsis, highly expressed genes have more and
longer introns and a larger primary transcript than genes expressed at a low level: higher …
longer introns and a larger primary transcript than genes expressed at a low level: higher …
The impact of recombination on nucleotide substitutions in the human genome
L Duret, PF Arndt - PLoS genetics, 2008 - journals.plos.org
Unraveling the evolutionary forces responsible for variations of neutral substitution patterns
among taxa or along genomes is a major issue for detecting selection within sequences …
among taxa or along genomes is a major issue for detecting selection within sequences …
Origin of minicircular mitochondrial genomes in red algae
Eukaryotic organelle genomes are generally of conserved size and gene content within
phylogenetic groups. However, significant variation in genome structure may occur. Here …
phylogenetic groups. However, significant variation in genome structure may occur. Here …
Origins and evolution of spliceosomal introns
F Rodríguez-Trelles, R Tarrío, FJ Ayala - Annu. Rev. Genet., 2006 - annualreviews.org
Research into the origins of introns is at a critical juncture in the resolution of theories on the
evolution of early life (which came first, RNA or DNA?), the identity of LUCA (the last …
evolution of early life (which came first, RNA or DNA?), the identity of LUCA (the last …
Evolution of complex genome architecture in gymnosperms
T Wan, Y Gong, Z Liu, YD Zhou, C Dai, Q Wang - GigaScience, 2022 - academic.oup.com
Gymnosperms represent an ancient lineage that diverged from early spermatophytes during
the Devonian. The long fossil records and low diversity in living species prove their complex …
the Devonian. The long fossil records and low diversity in living species prove their complex …
Chromatin organization in sperm may be the major functional consequence of base composition variation in the human genome
Chromatin in sperm is different from that in other cells, with most of the genome packaged by
protamines not nucleosomes. Nucleosomes are, however, retained at some genomic sites …
protamines not nucleosomes. Nucleosomes are, however, retained at some genomic sites …
The evolution of intron size in amniotes: a role for powered flight?
Q Zhang, SV Edwards - Genome biology and evolution, 2012 - academic.oup.com
Intronic DNA is a major component of eukaryotic genes and genomes and can be subject to
selective constraint and have functions in gene regulation. Intron size is of particular interest …
selective constraint and have functions in gene regulation. Intron size is of particular interest …
Mice and men: their promoter properties
Using the two largest collections of Mus musculus and Homo sapiens transcription start sites
(TSSs) determined based on CAGE tags, ditags, full-length cDNAs, and other transcript data …
(TSSs) determined based on CAGE tags, ditags, full-length cDNAs, and other transcript data …
Tandemly repeated DNA families in the mouse genome
AS Komissarov, EV Gavrilova, SJ Demin, AM Ishov… - BMC genomics, 2011 - Springer
Background Functional and morphological studies of tandem DNA repeats, that combine
high portion of most genomes, are mostly limited due to the incomplete characterization of …
high portion of most genomes, are mostly limited due to the incomplete characterization of …