Effect of local active fluctuations on structure and dynamics of flexible biopolymers

S Dutta, A Ghosh, AJ Spakowitz - Soft Matter, 2024 - pubs.rsc.org
Active fluctuations play a significant role in the structure and dynamics of biopolymers (eg
chromatin and cytoskeletal proteins) that are instrumental in the functioning of living cells …

Temporal integration of inductive cues on the way to gastrulation

S McFann, S Dutta, JE Toettcher… - Proceedings of the …, 2021 - National Acad Sciences
Markers for the endoderm and mesoderm germ layers are commonly expressed together in
the early embryo, potentially reflecting cells' ability to explore potential fates before fully …

Segmentation-based tracking of macrophages in 2D+ time microscopy movies inside a living animal

SA Park, T Sipka, Z Krivá, G Lutfalla… - Computers in Biology …, 2023 - Elsevier
The automated segmentation and tracking of macrophages during their migration are
challenging tasks due to their dynamically changing shapes and motions. This paper …

Resolving the design principles that control postnatal vascular growth and scaling

D Pichardo, J Braun, S Dutta, D Patra, P Bougaran… - bioRxiv, 2024 - biorxiv.org
After birth, tissues grow continuously until reaching adult size, with each organ exhibiting
unique cellular dynamics, growth patterns, and (stem or non-stem) cell sources. Using a …

Segmentation based tracking of cells in 2D+ time microscopy images of macrophages

SA Park, T Sipka, Z Kriva, G Lutfalla… - arXiv preprint arXiv …, 2023 - arxiv.org
The automated segmentation and tracking of macrophages during their migration are
challenging tasks due to their dynamically changing shapes and motions. This paper …

Computation of embryonic limb growth from microscopy images

J Moe - 2024 - upcommons.upc.edu
Microscopy techniques allow to capture 4D with a high degree of accuracy. The use of this
data for the mechanical analysis requires the computation of growth distribution. In this work …

Data-Driven Computational Models of Fruit Fly Embryogenesis

S Dutta - 2022 - search.proquest.com
In the process of development, a single cell divides into multiple cells, differentiates into
tissues and ultimately the tissues go through mechanical deformations to give rise to …

[图书][B] A Multiscale Characterization of ERK Signaling in the Early Drosophila Embryo

SE Keenan - 2021 - search.proquest.com
The development of an organism requires a continuous assortment of inputs and outputs—
an instruction manual for when cells should grow, divide, differentiate, change shape, etc …