Recommendations for improving statistical inference in population genomics
The field of population genomics has grown rapidly in response to the recent advent of
affordable, large-scale sequencing technologies. As opposed to the situation during the …
affordable, large-scale sequencing technologies. As opposed to the situation during the …
Meiotic recombination in mammals: localization and regulation
F Baudat, Y Imai, B De Massy - Nature Reviews Genetics, 2013 - nature.com
During meiosis, a programmed induction of DNA double-strand breaks (DSBs) leads to the
exchange of genetic material between homologous chromosomes. These exchanges …
exchange of genetic material between homologous chromosomes. These exchanges …
Whole‐genome sequencing identifies EN1 as a determinant of bone density and fracture
The extent to which low‐frequency (minor allele frequency (MAF) between 1–5%) and rare
(MAF≤ 1%) variants contribute to complex traits and disease in the general population is …
(MAF≤ 1%) variants contribute to complex traits and disease in the general population is …
High-resolution genetic mapping using the Mouse Diversity outbred population
Abstract The JAX Diversity Outbred population is a new mouse resource derived from
partially inbred Collaborative Cross strains and maintained by randomized outcrossing. As …
partially inbred Collaborative Cross strains and maintained by randomized outcrossing. As …
Recombination rate variation and speciation: theoretical predictions and empirical results from rabbits and mice
MW Nachman, BA Payseur - … Transactions of the Royal …, 2012 - royalsocietypublishing.org
Recently diverged taxa may continue to exchange genes. A number of models of speciation
with gene flow propose that the frequency of gene exchange will be lower in genomic …
with gene flow propose that the frequency of gene exchange will be lower in genomic …
Genome-wide analysis reveals novel molecular features of mouse recombination hotspots
Meiotic recombination predominantly occurs at discrete genomic loci called recombination
hotspots, but the features defining these areas are still largely unknown (reviewed in refs) …
hotspots, but the features defining these areas are still largely unknown (reviewed in refs) …
Patterns of recombination in snakes reveal a tug-of-war between PRDM9 and promoter-like features
In some mammals, notably humans, recombination occurs almost exclusively where the
protein PRDM9 binds, whereas in vertebrates lacking an intact PRDM9, such as birds and …
protein PRDM9 binds, whereas in vertebrates lacking an intact PRDM9, such as birds and …
A neutral model for the loss of recombination on sex chromosomes
DL Jeffries, JF Gerchen… - … Transactions of the …, 2021 - royalsocietypublishing.org
The loss of recombination between sex chromosomes has occurred repeatedly throughout
nature, with important implications for their subsequent evolution. Explanations for this …
nature, with important implications for their subsequent evolution. Explanations for this …
Genetic analysis of complex traits in the emerging Collaborative Cross
The Collaborative Cross (CC) is a mouse recombinant inbred strain panel that is being
developed as a resource for mammalian systems genetics. Here we describe an experiment …
developed as a resource for mammalian systems genetics. Here we describe an experiment …
A high‐density linkage map enables a second‐generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and …
Detailed linkage and recombination rate maps are necessary to use the full potential of
genome sequencing and population genomic analyses. We used a custom collared …
genome sequencing and population genomic analyses. We used a custom collared …