Holistic integration of omics tools for precision nutrition in health and disease

O Ramos-Lopez, JA Martinez, FI Milagro - Nutrients, 2022 - mdpi.com
The combination of multiple omics approaches has emerged as an innovative holistic scope
to provide a more comprehensive view of the molecular and physiological events underlying …

Towards building a quantitative proteomics toolbox in precision medicine: a mini-review

A Correa Rojo, D Heylen, J Aerts, O Thas… - Frontiers in …, 2021 - frontiersin.org
Precision medicine as a framework for disease diagnosis, treatment, and prevention at the
molecular level has entered clinical practice. From the start, genetics has been an …

Genetic regulation of the human plasma proteome in 54,306 UK Biobank participants

BB Sun, J Chiou, M Traylor, C Benner, YH Hsu… - BioRxiv, 2022 - biorxiv.org
Abstract The UK Biobank Pharma Proteomics Project (UKB-PPP) is a collaboration between
the UK Biobank (UKB) and thirteen biopharmaceutical companies characterising the plasma …

Mapping biological influences on the human plasma proteome beyond the genome

J Carrasco-Zanini, E Wheeler, B Uluvar, N Kerrison… - Nature …, 2024 - nature.com
Broad-capture proteomic platforms now enable simultaneous assessment of thousands of
plasma proteins, but most of these are not actively secreted and their origins are largely …

Proteome-wide Mendelian randomization implicates nephronectin as an actionable mediator of the effect of obesity on COVID-19 severity

S Yoshiji, G Butler-Laporte, T Lu, JDS Willett, CY Su… - Nature …, 2023 - nature.com
Obesity is a major risk factor for Coronavirus disease (COVID-19) severity; however, the
mechanisms underlying this relationship are not fully understood. As obesity influences the …

Association of epicardial adipose tissue with proteomics, coronary flow reserve, cardiac structure and function, and quality of life in heart failure with preserved ejection …

A Venkateshvaran, UL Faxen, C Hage… - European journal of …, 2022 - Wiley Online Library
Aim Epicardial adipose tissue (EAT) may play a role in the pathophysiology of heart failure
with preserved ejection fraction (HFpEF). We investigated associations of EAT with …

An approach for evaluating the effects of dietary fiber polysaccharides on the human gut microbiome and plasma proteome

O Delannoy-Bruno, C Desai… - Proceedings of the …, 2022 - National Acad Sciences
Increases in snack consumption associated with Westernized lifestyles provide an
opportunity to introduce nutritious foods into poor diets. We describe two 10-wk-long open …

Metabolic and proteomic signatures of type 2 diabetes subtypes in an Arab population

SB Zaghlool, A Halama, N Stephan… - Nature …, 2022 - nature.com
Abstract Type 2 diabetes (T2D) has a heterogeneous etiology influencing its progression,
treatment, and complications. A data driven cluster analysis in European individuals with …

Canonical correlation analysis for multi-omics: Application to cross-cohort analysis

MZ Jiang, F Aguet, K Ardlie, J Chen, E Cornell… - PLoS …, 2023 - journals.plos.org
Integrative approaches that simultaneously model multi-omics data have gained increasing
popularity because they provide holistic system biology views of multiple or all components …

Differences and commonalities in the genetic architecture of protein quantitative trait loci in European and Arab populations

G Thareja, A Belkadi, M Arnold… - Human molecular …, 2023 - academic.oup.com
Polygenic scores (PGS) can identify individuals at risk of adverse health events and guide
genetics-based personalized medicine. However, it is not clear how well PGS translate …