SMC complexes: from DNA to chromosomes

F Uhlmann - Nature reviews Molecular cell biology, 2016 - nature.com
SMC (structural maintenance of chromosomes) complexes—which include condensin,
cohesin and the SMC5–SMC6 complex—are major components of chromosomes in all …

CTCF and cohesin in genome folding and transcriptional gene regulation

M Merkenschlager, EP Nora - Annual review of genomics and …, 2016 - annualreviews.org
Genome function, replication, integrity, and propagation rely on the dynamic structural
organization of chromosomes during the cell cycle. Genome folding in interphase provides …

Cohesin-dependence of neuronal gene expression relates to chromatin loop length

L Calderon, FD Weiss, JA Beagan, MS Oliveira… - Elife, 2022 - elifesciences.org
Cohesin and CTCF are major drivers of 3D genome organization, but their role in neurons is
still emerging. Here, we show a prominent role for cohesin in the expression of genes that …

Functional and topological characteristics of mammalian regulatory domains

O Symmons, VV Uslu, T Tsujimura, S Ruf… - Genome …, 2014 - genome.cshlp.org
Long-range regulatory interactions play an important role in shaping gene-expression
programs. However, the genomic features that organize these activities are still poorly …

[HTML][HTML] Cohesin-dependent and-independent mechanisms mediate chromosomal contacts between promoters and enhancers

MJ Thiecke, G Wutz, M Muhar, W Tang, S Bevan… - Cell reports, 2020 - cell.com
It is currently assumed that 3D chromosomal organization plays a central role in
transcriptional control. However, depletion of cohesin and CTCF affects the steady-state …

[HTML][HTML] CTCF and cohesin: linking gene regulatory elements with their targets

M Merkenschlager, DT Odom - Cell, 2013 - cell.com
Current epigenomics approaches have facilitated the genome-wide identification of
regulatory elements based on chromatin features and transcriptional regulator binding and …

Recurrent inactivation of STAG2 in bladder cancer is not associated with aneuploidy

C Balbás-Martínez, A Sagrera… - Nature …, 2013 - nature.com
Urothelial bladder cancer (UBC) is heterogeneous at the clinical, pathological and genetic
levels. Tumor invasiveness (T) and grade (G) are the main factors associated with outcome …

Cohesin in cancer: chromosome segregation and beyond

A Losada - Nature Reviews Cancer, 2014 - nature.com
Cohesin is an evolutionarily conserved, four-subunit complex that entraps DNA fibres within
its ring-shaped structure. It was originally identified and named for its role in mediating sister …

CTCF/cohesin-mediated DNA looping is required for protocadherin α promoter choice

Y Guo, K Monahan, H Wu, J Gertz… - Proceedings of the …, 2012 - National Acad Sciences
The closely linked human protocadherin (Pcdh) α, β, and γ gene clusters encode 53 distinct
protein isoforms, which are expressed in a combinatorial manner to generate enormous …

ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL

G Wutz, R Ladurner, BG St Hilaire, RR Stocsits… - Elife, 2020 - elifesciences.org
Eukaryotic genomes are folded into loops. It is thought that these are formed by cohesin
complexes via extrusion, either until loop expansion is arrested by CTCF or until cohesin is …