Molecular simulation of electrode-solution interfaces
Many key industrial processes, from electricity production, conversion, and storage to
electrocatalysis or electrochemistry in general, rely on physical mechanisms occurring at the …
electrocatalysis or electrochemistry in general, rely on physical mechanisms occurring at the …
Molecular dynamics simulations of electrochemical interfaces
Molecular dynamics (MD) simulations have become a powerful tool for investigating
electrical double layers (EDLs), which play a crucial role in various electrochemical devices …
electrical double layers (EDLs), which play a crucial role in various electrochemical devices …
[HTML][HTML] Energy variational analysis of ions in water and channels: Field theory for primitive models of complex ionic fluids
B Eisenberg, Y Hyon, C Liu - The Journal of Chemical Physics, 2010 - pubs.aip.org
Ionic solutions are mixtures of interacting anions and cations. They hardly resemble dilute
gases of uncharged noninteracting point particles described in elementary textbooks …
gases of uncharged noninteracting point particles described in elementary textbooks …
PNP equations with steric effects: a model of ion flow through channels
TL Horng, TC Lin, C Liu… - The Journal of Physical …, 2012 - ACS Publications
The flow of current through an ionic channel is studied using the energetic variational
approach of Liu applied to the primitive (implicit solvent) model of ionic solutions. This …
approach of Liu applied to the primitive (implicit solvent) model of ionic solutions. This …
Dielectric effects in the self-assembly of binary colloidal aggregates
Electrostatic interactions play an important role in numerous self-assembly phenomena,
including colloidal aggregation. Although colloids typically have a dielectric constant that …
including colloidal aggregation. Although colloids typically have a dielectric constant that …
Poisson–Nernst–Planck systems for ion channels with permanent charges
B Eisenberg, W Liu - SIAM Journal on Mathematical Analysis, 2007 - SIAM
Ionic channels and semiconductor devices use atomic scale structures to control
macroscopic flows from one reservoir to another. The one-dimensional steady-state Poisson …
macroscopic flows from one reservoir to another. The one-dimensional steady-state Poisson …
Second-order Poisson–Nernst–Planck solver for ion transport
Abstract The Poisson–Nernst–Planck (PNP) theory is a simplified continuum model for a
wide variety of chemical, physical and biological applications. Its ability of providing …
wide variety of chemical, physical and biological applications. Its ability of providing …
(De) constructing the ryanodine receptor: modeling ion permeation and selectivity of the calcium release channel
D Gillespie, L Xu, Y Wang… - The Journal of Physical …, 2005 - ACS Publications
Biological ion channels are proteins that passively conduct ions across membranes that are
otherwise impermeable to ions. Here, we present a model of ion permeation and selectivity …
otherwise impermeable to ions. Here, we present a model of ion permeation and selectivity …
[HTML][HTML] Steric selectivity in Na channels arising from protein polarization and mobile side chains
Monte Carlo simulations of equilibrium selectivity of Na channels with a DEKA locus are
performed over a range of radius R and protein dielectric coefficient ɛ p. Selectivity arises …
performed over a range of radius R and protein dielectric coefficient ɛ p. Selectivity arises …
Machine learning surrogates for molecular dynamics simulations of soft materials
Molecular dynamics (MD) simulations accelerated by high-performance computing (HPC)
methods are powerful tools to investigate and extract the microscopic mechanisms …
methods are powerful tools to investigate and extract the microscopic mechanisms …