Water determines the structure and dynamics of proteins

MC Bellissent-Funel, A Hassanali, M Havenith… - Chemical …, 2016 - ACS Publications
Water is an essential participant in the stability, structure, dynamics, and function of proteins
and other biomolecules. Thermodynamically, changes in the aqueous environment affect …

High-pressure chemical biology and biotechnology

JL Silva, AC Oliveira, TCRG Vieira… - Chemical …, 2014 - ACS Publications
In his memorable book published in 1949, The Physics of High Pressure, 1 Bridgman states
that “it is a well-known result of thermodynamics that a substance is only completely …

Principles and practical applications of structure-based vaccine design

PO Byrne, JS McLellan - Current opinion in immunology, 2022 - Elsevier
Highlights•Summary of the basic principles of structure-based vaccine design.•Review of
recent advances (the years 2019–2021) in structure-based vaccine design.•Preview of …

Lessons from pressure denaturation of proteins

J Roche, CA Royer - Journal of the Royal Society …, 2018 - royalsocietypublishing.org
Although it is now relatively well understood how sequence defines and impacts global
protein stability in specific structural contexts, the question of how sequence modulates the …

[HTML][HTML] Modulation of allosteric coupling by mutations: from protein dynamics and packing to altered native ensembles and function

AN Naganathan - Current opinion in structural biology, 2019 - Elsevier
Highlights•Mutational effects are consistently felt beyond the first shell of
interactions.•Mutations modulate the dynamics and chemical shifts of distal …

A general mechanism for the propagation of mutational effects in proteins

N Rajasekaran, S Suresh, S Gopi, K Raman… - Biochemistry, 2017 - ACS Publications
Mutations in the hydrophobic interior of proteins are generally thought to weaken the
interactions only in their immediate neighborhood. This forms the basis of protein …

Monitoring protein folding through high pressure NMR spectroscopy

J Roche, CA Royer, C Roumestand - Progress in nuclear magnetic …, 2017 - Elsevier
High-pressure is a well-known perturbation method used to destabilize globular proteins. It
is perfectly reversible, which is essential for a proper thermodynamic characterization of a …

Effect of internal cavities on folding rates and routes revealed by real-time pressure-jump NMR spectroscopy

J Roche, M Dellarole, JA Caro… - Journal of the …, 2013 - ACS Publications
The time required to fold proteins usually increases significantly under conditions of high
pressure. Taking advantage of this general property of proteins, we combined P-jump …

Practical aspects of high-pressure NMR spectroscopy and its applications in protein biophysics and structural biology

JA Caro, AJ Wand - Methods, 2018 - Elsevier
Pressure and temperature are the two fundamental variables of thermodynamics.
Temperature and chemical perturbation are central experimental tools for the exploration of …

A universal pattern in the percolation and dissipation of protein structural perturbations

N Rajasekaran, A Sekhar… - The journal of physical …, 2017 - ACS Publications
Understanding the extent to which information is transmitted through the intramolecular
interaction network of proteins upon a perturbation, that is, an allosteric effect, has long …