Compilation and analysis of DNA sequences associated with apparent streptomycete promoters

WR Strohl - Nucleic Acids Research, 1992 - academic.oup.com
The DNA sequences associated with 139 apparent streptomycete transcriptional start sites
are compiled and compared. Of these, 29 promoters appeared to belong to a group which …

Plasmid rolling‐circle replication

JA Ruiz-Masó, C Machón… - … : Biology and Impact …, 2015 - Wiley Online Library
The main features that characterize rolling‐circle replication (RCR)(see Fig. 1A) derive from
its singular initiation mechanism, which relies on the sequence‐specific cleavage, at the nick …

Compilation, alignment, and phylogenetic relationships of DNA polymerases.

DK Braithwaite, J Ito - Nucleic acids research, 1993 - ncbi.nlm.nih.gov
SEQUENCE ALIGNMENT The multiple alignments ofthe amino acid sequences for this
update were performed in most cases by merely adding on to our original alignments (1) …

A conserved 3′→ 5′ exonuclease active site in prokaryotic and eukaryotic DNA polymerases

A Bernad, L Blanco, JM Lázaro, G Martin, M Salas - Cell, 1989 - cell.com
Summary The 3'~ 5'exonuclease active site of E. coli DNA polymerase I is predicted to be
conserved for both prokaryotic and eukaryotic DNA polymerases based on amino acid …

Compilation and alignment of DNA polymerase sequences.

J Ito, DK Braithwaite - Nucleic acids research, 1991 - ncbi.nlm.nih.gov
E. coli DNA polymerase IH is a multisubunit enzyme encoded by various dna genes (55); the
DNA polymerizing a-subunit encoded by thepolC (dnaE) gene (56) and the 3' …

Identification of residues critical for the polymerase activity of the Klenow fragment of DNA polymerase I from Escherichia coli.

AH Polesky, TA Steitz, ND Grindley… - Journal of Biological …, 1990 - ASBMB
The Klenow fragment structure, together with many biochemical experiments, has suggested
a region of the protein that may contain the polymerase active site. We have changed 7 …

A general structure for DNA-dependent DNA polymerases

L Blanco, A Bernad, MA Blasco, M Salas - Gene, 1991 - Elsevier
In addition to the general 3′–5′ exonuclease domain described by Bernad et al.[Cell 59
(1989) 219–228] significant amino acid (aa) sequence similarity has been found in the C …

An Extended− 10 Promoter Alone Directs Transcription of theDpnII Operon ofStreptococcus pneumoniae

AG Sabelnikov, B Greenberg, SA Lacks - Journal of molecular biology, 1995 - Elsevier
The genetic cassette encoding theDpnII restriction–modification system ofStreptococcus
pneumoniaegave transcription products of approximately 2.7 and 1.8 kilobases. The larger …

How E. coli DNA polymerase I (Klenow fragment) distinguishes between deoxy-and dideoxynucleotides

M Astatke, NDF Grindley, CM Joyce - Journal of molecular biology, 1998 - Elsevier
Deoxy-and dideoxynucleotides differ only in whether they have a hydroxyl substituent at C-
3′ of the ribose moiety, and yet the Klenow fragment DNA polymerase prefers the natural …

Nucleic acid encoding synthesis-deficient thermostable DNA polymerase

JE Dahlberg, VI Lyamichev, MAD Brow - US Patent 5,541,311, 1996 - Google Patents
[57] ABSTRACT A means for cleaving a nucleic acid cleavage structure in a site-speci? c
manner is disclosed. A cleaving enzyme having 5'nuclease activity without interfering …