Keystone taxa as drivers of microbiome structure and functioning
S Banerjee, K Schlaeppi… - Nature Reviews …, 2018 - nature.com
Microorganisms have a pivotal role in the functioning of ecosystems. Recent studies have
shown that microbial communities harbour keystone taxa, which drive community …
shown that microbial communities harbour keystone taxa, which drive community …
[HTML][HTML] From diversity to complexity: Microbial networks in soils
K Guseva, S Darcy, E Simon, LV Alteio… - Soil Biology and …, 2022 - Elsevier
Network analysis has been used for many years in ecological research to analyze
organismal associations, for example in food webs, plant-plant or plant-animal interactions …
organismal associations, for example in food webs, plant-plant or plant-animal interactions …
Climate warming enhances microbial network complexity and stability
Unravelling the relationships between network complexity and stability under changing
climate is a challenging topic in theoretical ecology that remains understudied in the field of …
climate is a challenging topic in theoretical ecology that remains understudied in the field of …
The plastisphere of biodegradable and conventional microplastics from residues exhibit distinct microbial structure, network and function in plastic-mulching farmland
The inhomogeneity of plastisphere and soil may result in different microbial communities,
thus potentially affecting soil functions. Biodegradable plastics offer an alternative to …
thus potentially affecting soil functions. Biodegradable plastics offer an alternative to …
[HTML][HTML] Specialized metabolic functions of keystone taxa sustain soil microbiome stability
Background The relationship between biodiversity and soil microbiome stability remains
poorly understood. Here, we investigated the impacts of bacterial phylogenetic diversity on …
poorly understood. Here, we investigated the impacts of bacterial phylogenetic diversity on …
Reduced microbial stability in the active layer is associated with carbon loss under alpine permafrost degradation
Permafrost degradation may induce soil carbon (C) loss, critical for global C cycling, and be
mediated by microbes. Despite larger C stored within the active layer of permafrost regions …
mediated by microbes. Despite larger C stored within the active layer of permafrost regions …
Selective enrichment of bacterial pathogens by microplastic biofilm
Microplastics have been found to be ubiquitous in freshwater ecosystems, providing a novel
substrate for biofilm formation. Here, we incubated biofilm on microplastics and two natural …
substrate for biofilm formation. Here, we incubated biofilm on microplastics and two natural …
NetCoMi: network construction and comparison for microbiome data in R
Motivation Estimating microbial association networks from high-throughput sequencing data
is a common exploratory data analysis approach aiming at understanding the complex …
is a common exploratory data analysis approach aiming at understanding the complex …
Initial soil microbiome composition and functioning predetermine future plant health
Plant-pathogen interactions are shaped by multiple environmental factors, making it difficult
to predict disease dynamics even in relatively simple agricultural monocultures. Here, we …
to predict disease dynamics even in relatively simple agricultural monocultures. Here, we …
Evidence of selective enrichment of bacterial assemblages and antibiotic resistant genes by microplastics in urban rivers
J Wang, X Qin, J Guo, W Jia, Q Wang, M Zhang… - Water Research, 2020 - Elsevier
The ubiquitous presence of microplastics in aquatic environments has recently drawn
considerable attention due to their potential threat to the entire ecosystem. The colonization …
considerable attention due to their potential threat to the entire ecosystem. The colonization …