Uncovering ecological state dynamics with hidden Markov models

BT McClintock, R Langrock, O Gimenez, E Cam… - Ecology …, 2020 - Wiley Online Library
Ecological systems can often be characterised by changes among a finite set of underlying
states pertaining to individuals, populations, communities or entire ecosystems through time …

Multi-state models for panel data: the msm package for R

C Jackson - Journal of statistical software, 2011 - jstatsoft.org
Panel data are observations of a continuous-time process at arbitrary times, for example,
visits to a hospital to diagnose disease status. Multi-state models for such data are generally …

How patients with multiple sclerosis acquire disability

FD Lublin, DA Häring, H Ganjgahi, A Ocampo… - Brain, 2022 - academic.oup.com
Patients with multiple sclerosis acquire disability either through relapse-associated
worsening (RAW) or progression independent of relapse activity (PIRA). This study …

Doctor ai: Predicting clinical events via recurrent neural networks

E Choi, MT Bahadori, A Schuetz… - Machine learning for …, 2016 - proceedings.mlr.press
Leveraging large historical data in electronic health record (EHR), we developed Doctor AI,
a generic predictive model that covers observed medical conditions and medication uses …

[HTML][HTML] Predicting healthcare trajectories from medical records: A deep learning approach

T Pham, T Tran, D Phung, S Venkatesh - Journal of biomedical informatics, 2017 - Elsevier
Personalized predictive medicine necessitates the modeling of patient illness and care
processes, which inherently have long-term temporal dependencies. Healthcare …

: A Convolutional Net for Medical Records

P Nguyen, T Tran, N Wickramasinghe… - IEEE journal of …, 2016 - ieeexplore.ieee.org
Feature engineering remains a major bottleneck when creating predictive systems from
electronic medical records. At present, an important missing element is detecting predictive …

Deepcare: A deep dynamic memory model for predictive medicine

T Pham, T Tran, D Phung, S Venkatesh - … , New Zealand, April 19-22, 2016 …, 2016 - Springer
Personalized predictive medicine necessitates modeling of patient illness and care
processes, which inherently have long-term temporal dependencies. Healthcare …

[图书][B] Hidden Markov models for time series: an introduction using R

W Zucchini, IL MacDonald - 2009 - taylorfrancis.com
Reveals How HMMs Can Be Used as General-Purpose Time Series ModelsImplements all
methods in RHidden Markov Models for Time Series: An Introduction Using R applies …

[HTML][HTML] Predictive modeling of the progression of Alzheimer's disease with recurrent neural networks

T Wang, RG Qiu, M Yu - Scientific reports, 2018 - nature.com
The number of service visits of Alzheimer's disease (AD) patients is different from each other
and their visit time intervals are non-uniform. Although the literature has revealed many …

Unsupervised learning of disease progression models

X Wang, D Sontag, F Wang - Proceedings of the 20th ACM SIGKDD …, 2014 - dl.acm.org
Chronic diseases, such as Alzheimer's Disease, Diabetes, and Chronic Obstructive
Pulmonary Disease, usually progress slowly over a long period of time, causing increasing …