Molecular strain typing of Mycobacterium tuberculosis: a review of frequently used methods

PW Ei, WW Aung, JS Lee, GE Choi… - Journal of Korean …, 2016 - synapse.koreamed.org
Tuberculosis, caused by the bacterium Mycobacterium tuberculosis, remains one of the most
serious global health problems. Molecular typing of M. tuberculosis has been used for …

Evaluation and strategy for use of MIRU-VNTR plus, a multifunctional database for online analysis of genotyping data and phylogenetic identification of …

C Allix-Béguec, D Harmsen, T Weniger… - Journal of clinical …, 2008 - Am Soc Microbiol
Because of its portable data, discriminatory power, and recently proposed standardization,
mycobacterial interspersed repetitive-unit-variable-number tandem-repeat (MIRU-VNTR) …

Three-year population-based evaluation of standardized mycobacterial interspersed repetitive-unit-variable-number tandem-repeat typing of Mycobacterium …

C Allix-Béguec, M Fauville-Dufaux… - Journal of clinical …, 2008 - Am Soc Microbiol
Standardized mycobacterial interspersed repetitive-unit-variable-number tandem repeat
(MIRU-VNTR) typing based on 15 and 24 loci recently has been proposed for …

Genetic Diversity of Mycobacterium tuberculosis Isolates from a Tertiary Care Tuberculosis Hospital in South Korea

IC Shamputa, J Lee, C Allix-Béguec… - Journal of clinical …, 2010 - Am Soc Microbiol
Tuberculosis (TB) remains an immense public health problem in the Republic of Korea
despite a more than fivefold decrease in the prevalence of the disease over the last 3 …

Genetic geography of Mycobacterium tuberculosis Beijing genotype: a multifacet mirror of human history?

I Mokrousov - Infection, Genetics and Evolution, 2008 - Elsevier
The Beijing genotype of Mycobacterium tuberculosis has been shown in many settings to be
hypervirulent and associated with multi-drug resistance. Its presently global and rapid …

Evaluation of 24 locus MIRU-VNTR genotyping of Mycobacterium tuberculosis isolates in Canada

S Christianson, J Wolfe, P Orr, J Karlowsky, PN Levett… - Tuberculosis, 2010 - Elsevier
The current gold standard for Mycobacterium tuberculosis complex (MTBC) genotyping is
insertion sequence (IS) 6110 restriction fragment length polymorphism (RFLP) as it provides …

The Forest behind the Tree: Phylogenetic Exploration of a Dominant Mycobacterium tuberculosis Strain Lineage from a High Tuberculosis Burden Country

M Cardoso Oelemann, HM Gomes, E Willery… - PLoS …, 2011 - journals.plos.org
Background Genotyping of Mycobacterium tuberculosis isolates is a powerful tool for
epidemiological control of tuberculosis (TB) and phylogenetic exploration of the pathogen …

Molecular epidemiology study of Mycobacterium tuberculosis and its susceptibility to anti-tuberculosis drugs in Indonesia

V Lisdawati, N Puspandari, L Rif'ati, T Soekarno… - BMC infectious …, 2015 - Springer
Abstract Background Genotyping of Mycobacterium tuberculosis helps to understand the
molecular epidemiology of tuberculosis and to address evolutionary questions about the …

Development of a Hierarchical Variable-Number Tandem Repeat Typing Scheme for Mycobacterium tuberculosis in China

T Luo, C Yang, Y Pang, Y Zhao, J Mei, Q Gao - PloS one, 2014 - journals.plos.org
Molecular typing based on variable-number tandem repeats (VNTR) analysis is a promising
tool for identifying transmission of Mycobacterium tuberculosis. However, the currently …

Characterization of Extensively Drug-Resistant Mycobacterium tuberculosis Clinical Isolates in China

Z Sun, Y Chao, X Zhang, J Zhang, Y Li… - Journal of clinical …, 2008 - Am Soc Microbiol
Thirteen extensively drug-resistant tuberculosis isolates which were highly resistant to a
broad spectrum of antituberculosis drugs were identified from 1,926 clinical isolates in …