In-cell structural biology by NMR: the benefits of the atomic scale
FX Theillet - Chemical reviews, 2022 - ACS Publications
In-cell structural biology aims at extracting structural information about proteins or nucleic
acids in their native, cellular environment. This emerging field holds great promise and is …
acids in their native, cellular environment. This emerging field holds great promise and is …
Cryo-EM in molecular and cellular biology
HR Saibil - Molecular Cell, 2022 - cell.com
This review summarizes the current state of methods and results achievable by cryo-electron
microscopy (cryo-EM) imaging for molecular, cell, and structural biologists who wish to …
microscopy (cryo-EM) imaging for molecular, cell, and structural biologists who wish to …
Improvement of cryo-EM maps by simultaneous local and non-local deep learning
Cryo-EM has emerged as the most important technique for structure determination of
macromolecular complexes. However, raw cryo-EM maps often exhibit loss of contrast at …
macromolecular complexes. However, raw cryo-EM maps often exhibit loss of contrast at …
Accurate prediction of protein structural flexibility by deep learning integrating intricate atomic structures and Cryo-EM density information
The dynamics of proteins are crucial for understanding their mechanisms. However,
computationally predicting protein dynamic information has proven challenging. Here, we …
computationally predicting protein dynamic information has proven challenging. Here, we …
Model building of protein complexes from intermediate-resolution cryo-EM maps with deep learning-guided automatic assembly
Advances in microscopy instruments and image processing algorithms have led to an
increasing number of cryo-electron microscopy (cryo-EM) maps. However, building accurate …
increasing number of cryo-electron microscopy (cryo-EM) maps. However, building accurate …
Low-temperature plasma for biology, hygiene, and medicine: Perspective and roadmap
Plasma, the fourth and most pervasive state of matter in the visible universe, is a fascinating
medium that is connected to the beginning of our universe itself. Man-made plasmas are at …
medium that is connected to the beginning of our universe itself. Man-made plasmas are at …
Stacked binding of a PET ligand to Alzheimer's tau paired helical filaments
GE Merz, MJ Chalkley, SK Tan, E Tse, J Lee… - Nature …, 2023 - nature.com
Accumulation of filamentous aggregates of tau protein in the brain is a pathological hallmark
of Alzheimer's disease (AD) and many other neurodegenerative tauopathies. The filaments …
of Alzheimer's disease (AD) and many other neurodegenerative tauopathies. The filaments …
Residue-wise local quality estimation for protein models from cryo-EM maps
An increasing number of protein structures are being determined by cryogenic electron
microscopy (cryo-EM). Although the resolution of determined cryo-EM density maps is …
microscopy (cryo-EM). Although the resolution of determined cryo-EM density maps is …
Accurate model and ensemble refinement using cryo-electron microscopy maps and Bayesian inference
Converting cryo-electron microscopy (cryo-EM) data into high-quality structural models is a
challenging problem of outstanding importance. Current refinement methods often generate …
challenging problem of outstanding importance. Current refinement methods often generate …
Cryo-electron microscopy of adeno-associated virus
SM Stagg, C Yoshioka, O Davulcu… - Chemical …, 2022 - ACS Publications
Adeno-associated virus (AAV) has a single-stranded DNA genome encapsidated in a small
icosahedrally symmetric protein shell with 60 subunits. AAV is the leading delivery vector in …
icosahedrally symmetric protein shell with 60 subunits. AAV is the leading delivery vector in …